Methanobacterium sp. BAmetb5: CIT02_05850
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Entry
CIT02_05850 CDS
T05745
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIT02_05850 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meto03021
]
CIT02_05850 (rpoA1)
Enzymes [BR:
meto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIT02_05850 (rpoA1)
Transcription machinery [BR:
meto03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CIT02_05850 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
USP7_ICP0_bdg
Motif
Other DBs
NCBI-ProteinID:
AXV39868
UniProt:
A0A347ALM1
LinkDB
All DBs
Position
complement(1225713..1228328)
Genome browser
AA seq
871 aa
AA seq
DB search
MKGILKKIAQINFGLLSPENIRRMSVTKIVTPDTYDEDGYPIEAGLMDPRLGVIDPGLRC
RSCGSKGGDCQGHFGHINLARPVVHVGFADTIHKILRSTCSECGKVLLTETERIDYQDRI
ESRLQNEESITGLVKDVYATARRDKCPHCDTEQEDVKIDKPVSIVEGNYKLTPSEVRERL
EKIPEEDYLFLGINSKVARPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTHKLVDILR
INQRLKENMEAGAPQLIVEDLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKG
KEGRFRSNLSGKRVNFSARTVISPDPNISINNVGVPEMIATEVTVPIYVTDWNREEMQKY
ILNGPKVHPGANYVIRPDGRKIRVYDETKEAIVEKLEPGFVVERHLMDGDIVLFNRQPSL
HRMSMMAHEVKVLPYKTFRLNLCVCPPYNADFDGDEMNMHVFQTEESRAEAKSLMRVQEH
ILSPRFGGPIIGGIHDHISGAYLLTREGSNFREDDVFQMLKKSQLPIPKPRNREWTGKEI
YSLLLPKDLNMVYKAEICRKCDECLKQECRNDAYVVIENGELKSGAIDEKAYGAFAGKIL
DSIVKEYGTDRAREFLDSATKLAISGIMKRGFTTSTADEEIPQEAKDRIEELLRKAEEKV
EMLIAAYHADELEALPGRSLRETLEMKIMQVLGEARDKSGEIAESYFGMDNHAVIMALTG
ARGSMLNLTQIAACVGQQSVRGGRIERGYSKRTLPHFQEGELGAKASGFVHSSYKAGLDP
LEFFFHAMGGREGLVDTAIRTAQSGYMQRRLVNALQDLSVNTDKTVRDNRGVVIQTYYGE
DGIDPAKSDYGKVADIDRLIEEMRIKAKAGK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaattttaaagaagatcgcccagatcaactttggcctgctatcgccggagaac
atccggagaatgtccgtcaccaaaatcgtgaccccggatacctacgatgaagatggatac
cccatagaagcgggtctaatggacccccgactgggagtcatcgacccaggactgagatgt
cgatcatgcggttctaaaggaggagactgtcagggacactttggccacataaacctggcc
cgaccagtagtccacgtgggattcgcagacaccatacacaaaatcctgcgttcaacctgc
agtgaatgtggaaaggtgcttttaactgaaactgaaagaatagactaccaagacagaatt
gaatcccgattacaaaacgaagaaagcatcaccggactggtaaaggatgtatacgccacc
gcacgtcgggacaaatgtccccactgtgacactgaacaggaagacgtcaagattgataaa
ccagtatccatagttgaaggtaactacaaattaacccccagcgaagtccgtgaacgtctg
gaaaaaatcccggaagaagattacctattcctgggaataaactccaaagtagcccgacca
gaatggatggtactcacggttctacccgtaccaccggtcacagtgcgtccttccataacc
ctggaaaccggtgaaagatccgaggatgacctgacccacaaactggtagacatcctgcgt
atcaaccagcgcctcaaggagaacatggaggccggagcaccacaactcattgtggaagat
ctatgggaattactacagtatcacgtcaccacctactttgataatgaagcttcaggagtg
cctccagcccggcaccgatccggaagaccactcaagactctggcccaacgtttaaaaggt
aaggaaggacgtttcaggagtaacctctcaggtaaaagggttaacttctctgccaggaca
gttatctccccggaccccaacatcagtattaacaacgtaggggtgccagagatgattgcc
actgaggttacggtacctatctacgtcactgactggaaccgggaggaaatgcagaagtac
atcctcaacggacctaaagtacaccccggtgccaattatgttattaggcccgatggccga
aagatcagggtctatgacgaaaccaaggaagctatcgtggagaaactggaacccggattc
gtggtggaaagacacctcatggatggagatattgtactcttcaaccgacaaccatcactc
caccgtatgtccatgatggcccacgaggtaaaggtcctgccctataagactttcagactc
aacctctgtgtatgtccaccatacaacgcagatttcgacggggacgaaatgaacatgcac
gtcttccagacagaagaatcacgtgctgaagctaaatcccttatgcgggttcaggaacac
attttatcccctcgtttcggagggccaattattggtggtattcacgatcacatatccggt
gcctacctcctcaccagggaaggatctaacttccgagaggatgacgtcttccagatgctt
aaaaaatcccagttacccatacccaaaccaagaaacagggaatggactggtaaagagata
tacagtctgctactgcccaaagaccttaacatggtttacaaagcagaaatctgccgtaaa
tgtgatgaatgcctgaaacaggaatgtcgaaacgatgcctacgtggttatagaaaatggg
gaactcaaatcaggagccatagatgaaaaggcatatggtgcatttgccggtaagatactg
gactccattgttaaggagtacggaactgaccgagcccgagaattcttggattcagccact
aaactggccatctcgggtattatgaaacggggattcaccaccagtactgccgatgaagag
ataccccaggaagccaaggaccggattgaggaactccttcgtaaggcagaagaaaaggta
gaaatgctcattgcggcgtaccatgccgatgaactggaagccttgcctggacgcagcctc
cgggaaaccctggagatgaagatcatgcaggttctaggtgaagccagggacaaatcaggg
gaaatagccgaaagctactttggaatggataaccacgcagttatcatggccttaaccggg
gcccgtggttcaatgctaaacctgactcagatcgccgcctgtgtggggcagcaatctgta
cgtgggggtcgtattgaaaggggttacagtaaaagaaccctacctcacttccaggaaggt
gaacttggtgcaaaggccagtggattcgtccactccagttacaaggctggtctcgaccca
ctggaatttttcttccacgctatgggaggacgtgaaggactggtggataccgctatccgt
accgcccagagtggttacatgcaacgccgactggtgaatgctctacaggatctatcagtc
aacactgacaaaactgtacgtgacaaccggggagtggttatccagacttactacggtgaa
gatggaatcgacccggccaagagtgactacggaaaggtagctgacattgaccgtttaata
gaagaaatgagaataaaagccaaagcaggcaaataa
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