Methanobrevibacter sp. TLL-48-HuF1: K4897_06935
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Entry
K4897_06935 CDS
T08254
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
metv
Methanobrevibacter sp. TLL-48-HuF1
Pathway
metv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K4897_06935 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metv03021
]
K4897_06935 (rpoB)
Enzymes [BR:
metv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K4897_06935 (rpoB)
Transcription machinery [BR:
metv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
K4897_06935 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Auto_anti-p27
zinc_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
URN49026
UniProt:
A0A9E7ISR4
LinkDB
All DBs
Position
1469710..1471521
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AA seq
603 aa
AA seq
DB search
MDSAKIYINGELLGYCKDPESFTNEMREKRRNGKVSHEMNITYYDKNNEIYIFNDPGRAR
RPLIIVKDGKPVLTDKHLEKVAKGELKWDDLIDNGFIEYLDAEEEENSYIAMSIADLNEE
HTHLEIDPATMLGICAGIIPFSDHNSSPRNTMEAGMTKQALGLYVSNYALRTDTRAHLLH
HPQTPIVKTRIIDSTNYDKRPSGQNFVVALMSYEGYNMEDAMVINKGSLERGLARSSFFR
AYDTAEKRYPGGQEDKFEVPDKNIKGYRSEDAYRHLDDDGVVNPESYVESGDVLIGKTSP
PRFLEEIDEFGTVAEKRRETSVTVRHGEKGIVDAVLLTETVEGSRLAKIRVRDTRQPEFG
DKFASRHGQKGVLGLILSPEDVPFTESGVVPDLIVNPHAIPSRMSVGQVLEMVAGKAGCL
EGERVDGTPFNTELEKEIKQQLKNHGFESAGCESLYNGVTGERIEAEIFVGVAYYQKLHH
MTTDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALTLKERLLDESDK
YEAIVCENCGMLAVYDKNKNKKYCPICGDVETYPIEISYAFKLLLDELKSLCIFPKLVLG
DKT
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgctaagatttatattaatggggagcttttaggatactgtaaagatccggaa
agtttcaccaatgaaatgagagaaaaaaggagaaatggtaaggtttctcatgaaatgaat
attacttattatgataaaaataatgagatttatatattcaatgaccctggtagggcaaga
aggccgttaatcattgtaaaagatggcaaaccagttctcacagataaacatttagagaaa
gtagctaaaggtgaattaaaatgggacgatttaatagacaatggtttcattgaatacttg
gatgccgaagaggaagaaaactcctatattgctatgagtattgctgatttaaatgaagaa
catactcatttggaaattgacccggctactatgcttggaatttgtgcaggtattattccg
ttttccgatcacaattcttcaccaaggaatactatggaagcaggtatgacaaaacaagca
ttaggattatatgtttctaactatgcattacgtacagatacaagggctcacttattacac
catccgcaaactcctattgtaaaaacacgtattattgattcaactaattatgacaaaaga
ccatcaggtcagaactttgttgtagctcttatgtcttacgaaggatacaacatggaagat
gcaatggttattaacaaaggttctcttgaaagaggattagctaggtcttcatttttcaga
gcttatgatactgctgaaaaaaggtatcctggtggacaagaggataaatttgaggttcct
gacaaaaacattaaaggttaccgttccgaagatgcttacaggcatttagatgatgatggt
gttgttaaccctgaatcatatgttgaatctggtgatgtattaattggtaaaacttcacca
ccaagattcttggaagaaatcgatgaatttggtactgtagctgaaaaaagaagagaaact
tctgtaacagtcagacacggtgaaaaaggtattgtcgatgctgttcttttaactgaaact
gttgaaggaagccgattggctaaaatcagggtgagggataccaggcaacctgagttcggg
gataaatttgcatcaaggcacggtcagaaaggggttcttggtttaatattatctcctgaa
gatgttccttttacagaatctggtgttgttcccgatttaattgttaaccctcacgctatt
ccttccaggatgtctgtaggacaagtgcttgagatggtagctggtaaagcaggctgtctt
gaaggtgagcgtgttgacggaactccatttaacacagaacttgaaaaagaaatcaaacag
caacttaaaaatcacggatttgaatctgcaggttgtgaatcattatataatggtgtaacc
ggagaaagaatcgaagctgaaatatttgttggtgttgcatattaccaaaaattacaccac
atgactactgataaagtttatgctcgttcaagaggtcctgtacaagttcttacccgtcag
cctactgaaggaagagctcgtgaaggtggtttaaggtttggagaaatggaaagagattgt
cttattgcacacggtgcagctcttaccttaaaagaaaggcttttagatgagtctgacaaa
tatgaagctattgtctgtgaaaattgtggtatgttagcagtatatgataagaataaaaat
aaaaaatactgtccaatttgtggagatgttgaaacttatccgatagaaatttcatacgca
tttaaattattattagatgaacttaagagtttatgtattttccctaaattagttttagga
gacaaaacataa
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