Phytobacter sp. MRY16-398: MRY16398_30070
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Entry
MRY16398_30070 CDS
T05735
Symbol
ydbK
Name
(GenBank) pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00010
Glycolysis / Gluconeogenesis
mety00020
Citrate cycle (TCA cycle)
mety00620
Pyruvate metabolism
mety00650
Butanoate metabolism
mety01100
Metabolic pathways
mety01110
Biosynthesis of secondary metabolites
mety01120
Microbial metabolism in diverse environments
mety01200
Carbon metabolism
mety01210
2-Oxocarboxylic acid metabolism
Module
mety_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MRY16398_30070 (ydbK)
00020 Citrate cycle (TCA cycle)
MRY16398_30070 (ydbK)
00620 Pyruvate metabolism
MRY16398_30070 (ydbK)
00650 Butanoate metabolism
MRY16398_30070 (ydbK)
Enzymes [BR:
mety01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
MRY16398_30070 (ydbK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4
Fer4_16
Fer4_10
Fer4_21
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Fer4_17
Fer4_18
Transketolase_C
Fer4_4
Fer4_15
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BBE77951
UniProt:
A0A348DEN4
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All DBs
Position
3119274..3122798
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AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLNNVWGDTPRVVEMQSE
AGAIAAVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAGSVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV
PLSDDTIRALMPQDEIDAHRSRALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMDAFAAATGRQYKPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL
FRPFSAQHLLAVLPESAKTIAVLDRTKEPGALAEPLYLDVMTALAEAFNSGERETLPRVI
GGRYGLSSKEFGPDCVLSVFNELRASKPKPRFTVGIYDDVTNLSLPLPENTLPSKSRLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEHPIRSAYL
VSQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWDRLPQEVQAVLNQKQAHF
HVINAAKIARECGLAARINTVMQMAFFHLTRILPGDSALAELQGAIAKSYSNKGQELVER
NWQALAMARESLFEVPLQQVNPTSAPRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPVWKEELCTQCNHCVAACPHSAIRAKVVSPEAMEQAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KVNFDYFLNLPEIDRSKLERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDAAGRGPAWANSLFEDNAEFGLGFRLTVDQHRKRVMRL
LEQFAAHIPGELNDALHADATPEERREQVASLRQALAGVEEAKELLTDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSDALAETLLNEQRFRRLNAQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKSEKSSTE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatcactattgacggtaatggcgcggtcgcttcggtggcgttccgtaccagtgaagtt
atcgccatctatcctattacccccagttcaaccatggctgagcaggcagacgcctgggcc
gggaatgggctaaataacgtttggggtgatacgccacgcgttgtggagatgcaatccgaa
gccggggccattgctgcggtacacggtgcattgcaaacgggcgcgctttctacctccttt
acctcgtcgcagggtctgttactgatgatcccgacgctgtataaactcgccggtcagctc
acgccgttcgtgttgcacgtggcggcccgtacggtagctacccatgcgctctcaatattc
ggcgatcattccgatgtgatggctgtccgtcagactggctgcgcgatgctctgtgcgggg
agtgtgcaggaggcgcaggactttgcgctgatttcacatatcgcgacgctcaaaagccgt
gtgccgtttattcatttctttgatggctttcgtacctcgcacgaaattaacaagattgta
ccgctctctgacgatacgatccgcgccctgatgccacaggacgagattgatgcccaccgt
tcccgtgcgctcaatcctgaacaccccgtcattcgcggtacctccgccaacccggatacc
tatttccagtcacgtgaagcgactaacccctggtacaacgccgtctatgaccacgttgag
caggctatggatgcgtttgccgccgccaccggacgccagtacaagccgtttgagtattac
ggtcatcctcaggctgagcgcgtcattatcctgatgggttcggcaattggtacctgtgaa
gaagtcgtcgacgaactgctcactcgcggtgagaaagtcggtgtactgaaagtgcgcctg
ttccgtccgttcagcgcgcagcatctgcttgccgtcttaccggagtcggcaaaaactata
gccgtactcgatcgcacaaaagagcctggtgcgctggcagaacctctctatctggacgtg
atgaccgcgctcgcagaagcctttaatagcggtgaacgcgaaaccctgccccgggttatc
ggtgggcgctacggattatcatccaaagagtttggcccggattgcgttctgtccgtcttc
aatgaactgcgcgccagcaaacctaaaccgcgttttaccgtcggcatttatgatgacgtg
acaaacctgtcactgccattgccggaaaatacgttgccatcaaaatcccgactggaagcc
ctgttttatggacttggcagtgacgggagtgtttcagccaccaagaacaacattaagatt
attggtaattcaacgccgtggtatgcacaggggtattttgtttacgactccaaaaaagcg
ggcggcctgacagtttcgcacctgcgcgtcagtgagcacccgattcgctcagcctatctg
gtctcgcaggcggatttcgttggctgccatcaattgcagtttattgataaatatcagatg
gcggagcgtctgaaacctggcggcattttcctgctcaacaccccgtacagtgccgacgaa
gtgtgggatcgactgccgcaggaagtacaggctgtgctgaaccaaaagcaagcccatttc
cacgtcattaacgccgcgaaaattgcccgcgaatgtggcctggccgcacgaatcaacacg
gtaatgcagatggccttcttccatctgacccgcatcctgccaggcgacagcgcgctggcg
gagttgcaaggggccattgccaaaagctacagcaacaaaggtcaggaactggttgagcgc
aactggcaggctctggcaatggcgcgcgaatcgctgtttgaggttccgctacaacaggtg
aatccgaccagcgcgccccgcccacccgtagtctccgatgccgcccccgatttcgttaaa
accgttacggccgccatgctggcaggcctgggtgacgccctgcccgtctctgcgctgccg
ccagacggtacatggccgatgggcaccactcgctgggagaaacgcaacatcgccgaagag
atccctgtctggaaagaggagctctgtacgcaatgtaaccactgcgttgcggcctgccca
cattcagccattcgcgccaaagtggtttcacccgaagcgatggaacaggctccggcaagc
ctgcattcactggatgtgaaatctcgtgatatgcgtggacagaagtacgtgctgcaggtg
gcgccagaggattgcaccgggtgtaacctgtgcgtggaagtctgcccggccaaagatcgt
cagaacccggaaatcaaagccatcaatatgatgtcgcgtctggagcacgttgaagaagag
aaagtgaatttcgactacttcctcaatctgccggaaattgaccgcagcaaactggaacgt
atcgatattcgcacctcgcagcttatcagcccgctgtttgaatactccggcgcctgttcc
ggctgcggcgaaacgccgtacatcaagctgttaacccaactgtatggcgatcgcatgctg
atagctaacgccaccgggtgttcgtcgatttatggcggtaacttaccttccacaccgtat
accactgatgcggcaggacgtggcccggcatgggcgaactccctgtttgaggataacgcc
gagtttggtctgggcttccgcctgacggtcgatcagcaccgcaaacgcgtgatgcgcctg
ctggaacagttcgccgcgcatattccaggcgaactcaacgatgcgctgcatgccgatgcg
acaccggaagagcgtcgtgaacaggttgcctcgctgcgtcaggcactggccggtgtcgag
gaggccaaagagctgttaaccgatgctgatgcgctggtcgagaaatcgatctggctgatt
ggcggcgacggctgggcctatgacattggctttggtggtctggatcatgtgctcagcctc
accgagaacgtcaatatcctggtgctcgatacgcaatgttattccaacaccggcggtcag
gcatccaaagccacgccgcttggagcggtcaccaagtttggtgaacatggcaagcgtaag
gcacgtaaggatcttggtgtcagtatgatgatgtacggccatgtttatgtcgcgcagatt
tcacttggcgcgcagctcaaccagacggtaaaagcgattcaggaagcggaagcctaccct
ggaccgtcgttgatcattgcctatagtccctgtgaggagcatggctatgatctggcgtta
agccatgatcagatgcgtcaacttacggcaaccggcttctggccactgtatcgcttcgac
ccgcgccgtgcggatgaaggcaaattgccgctggcgctcgattcccgtccaccgtctgat
gcgctggccgaaacgctgctcaacgagcaacgcttcaggcggcttaacgcccagcaaccg
gaagtggcagaacagctctggaaagatgccgccgccgatctgcaaaaacgctatgacttc
ctcgcccaaatggcaggaaaatcggaaaaaagctcgacggaataa
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