Candidatus Methanogranum gryphiswaldense: KRP56_00030
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Entry
KRP56_00030 CDS
T08253
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Pathway
meuz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KRP56_00030 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meuz03021
]
KRP56_00030 (rpoA2)
Enzymes [BR:
meuz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KRP56_00030 (rpoA2)
Transcription machinery [BR:
meuz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
KRP56_00030 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
DUF4262
HHH_2
DUF4054
Motif
Other DBs
NCBI-ProteinID:
UAL07705
LinkDB
All DBs
Position
complement(4389..5831)
Genome browser
AA seq
480 aa
AA seq
DB search
MAKKDTLKALMNREISEEVSNLLLTKYNTLSAISAAGTEELVELGLSEEEAESVLNKIGK
RTARKATPVKTKKTVEEAKAEPMEEVFHTHELTAIESQLFSIVNKYSQPLPMKIVCDIAI
AIQDASFDDATCEKLIKVAERMYTAHLMDQNESAGVMAAHSIGEPGTQMNMRTFHYAGVA
NINVTQGLPRLIEIVDARRIPSTPSMDIPLKGIAAEDESVARHVASEIEMTTLLDVAAVE
TDITNMRLVIVPDLRKMEIRGLRTEDIVDKLNRVKAVRGLVNISDFDIVIASDEPSFKKL
QSMYDAVKNSKIKGIDGITRAVLSHTEGTWKIITEGSNLKEVLKIEGVDTENVMTNSILE
VADVLGIEAARNSIIHEAMGTLGEAGLDVDIRHIMLVADLMTNDGYVKAIGRHGVSGKKS
SVLARAAFEITAAHLLHAAMVGEVDHLEGVTENIIVGQPVTLGTGAVNLIYTPKKKGEDE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaggatactttgaaggcattgatgaatagggaaatcagcgaggaggtctcg
aatcttctgctgacgaaatacaacaccctcagcgcaatcagtgcggcagggaccgaagaa
ctcgtcgaattgggattgtcagaggaagaagccgagtcggtgctaaacaaaataggtaaa
cgcacggctcgcaaggccacaccggtcaagaccaagaaaactgtcgaagaagccaaggca
gaaccaatggaagaggtcttccacactcacgagttgacagctatagagagccagcttttc
tctattgtcaataagtacagccaacctctgcctatgaagatcgtatgtgacatcgcaatt
gccattcaggatgccagtttcgatgatgctacatgtgagaagctcataaaggtcgcagag
aggatgtacacagcacatctcatggatcagaatgagtcagctggagtaatggcggcgcac
tctatcggagaaccaggtacacagatgaacatgcgtaccttccactacgcaggagttgcg
aacatcaacgttacgcagggtctgcccaggttgatcgagatcgttgatgccaggcgtata
ccaagtacaccttcgatggacattcctctaaaaggaattgcagccgaagatgaaagcgtg
gcacgccacgtggcgtccgagatagagatgaccacgctcctcgatgtagcagccgtcgaa
acagacatcaccaacatgagactggtgatcgttccggatcttcgcaagatggagatccgt
ggattgaggaccgaggacattgtggataagctcaacagagtgaaggccgtccgtggattg
gtcaatatctcggatttcgatatagtgatagcttcggacgaaccgtcctttaaaaaactc
cagtcaatgtacgatgcagtcaagaactctaagatcaagggcattgacggcatcacaaga
gcagttctttcacacacagaaggaacctggaagattattaccgaaggaagtaatctgaaa
gaggtcctgaagatcgaaggagttgacactgaaaatgtcatgaccaacagtatcctggag
gtagcagacgtcttgggtatcgaggccgcaaggaactcgataatacacgaggctatggga
actctcggagaagctggtctggatgtagatatcaggcacatcatgctagtggctgatctc
atgaccaatgatggttatgtgaaggctatcggaaggcacggagtgtctggaaagaaatcc
tctgtactcgcaagagcggcattcgaaatcacagctgcgcatctgttgcacgctgcgatg
gtcggagaggtcgatcacctcgaaggagtaacagagaacattatcgttggacagccggtt
acattgggaaccggtgcagtaaacttaatttacacacccaagaaaaagggggaagatgaa
tga
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