Methanobacterium paludis: MSWAN_0679
Help
Entry
MSWAN_0679 CDS
T01509
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mew
Methanobacterium paludis
Brite
KEGG Orthology (KO) [BR:
mew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mew03016
]
MSWAN_0679
Enzymes [BR:
mew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
MSWAN_0679
Transfer RNA biogenesis [BR:
mew03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
MSWAN_0679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Mycop_pep_DUF31
Motif
Other DBs
NCBI-ProteinID:
AEG17714
UniProt:
F6D6K1
LinkDB
All DBs
Position
735200..736477
Genome browser
AA seq
425 aa
AA seq
DB search
MNIYIETFGCTFNQADSQIMAGLLKENQEKIVSKPEDADVIIINTCYVKHPTEQKAINRI
HKVQKQFPDKKLIISGCMVEIDKKKLQKAAPNASWIGPHKVTSTPEIVKSVFNGENVRSI
GYGTDCKVCLPKIRSNPFIHIVQICEGCNGDCSYCCTRFARGSLQSYPTELIKREVEEAV
AEGCVEIQITAQDTAAYGKDTGTSLSKLINEITTIEGDFKIRVGMMHPKSIMDDVDGIIK
AFKNEKVYKFLHIPIQSGNDDVLRDMNRGHTVADFKDVVSKFKENIPEMSISTDVIVGYP
TEDEDAFKDTLNLVADIRPDFINISKYGHRPGTRSSLMEEISHESMKKRSKSLNDLKTAI
SYENNLKMLGSTQNVVITGKGSKGGYISRANSYKQVIVENAVIGSFSEAKIIDAKSTYLM
GNLIH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctacatcgaaacattcggctgcacattcaaccaagcagattcacagataatg
gcaggcctcctcaaggaaaatcaggaaaaaatcgtatcaaaacccgaggatgctgatgtt
ataatcataaacacgtgctacgtgaaacatccaacagaacaaaaagccataaatagaatt
cacaaggtgcaaaaacaatttcctgacaaaaagctcataatatctgggtgcatggttgaa
atagacaaaaaaaagctccaaaaagctgcacccaatgcaagctggataggaccccacaaa
gtaacatcaactcctgaaatcgtgaaatcagttttcaacggagaaaatgttagaagcata
ggttacggtacagattgcaaggtttgccttccaaaaatacgttcaaacccgtttatacat
atagtgcagatatgtgaaggatgcaatggtgattgcagttattgctgcacccgatttgca
cgtggaagccttcaaagttatccaactgaacttataaagcgtgaagtagaagaagcagta
gctgagggatgtgttgagatccagattacagcccaggatacagcagcttatggtaaagat
acaggtacttctttatctaaacttataaatgaaataacaactattgaaggtgattttaag
atcagggtcggcatgatgcaccctaaaagcattatggatgatgttgatggcataataaaa
gctttcaaaaacgaaaaagtttacaaattcttgcacatcccaattcaaagtggtaacgac
gatgttttaagggacatgaatcggggacataccgtggcagattttaaggatgttgtctca
aaattcaaagagaacataccagagatgtccatttcaacggatgtgattgttggttatcca
acagaggatgaagatgcatttaaagacacattaaacctggttgcagatataagacctgat
tttatcaacatctccaagtacggacacagaccaggcacaagatcatccctcatggaagag
ataagccatgaatcaatgaaaaaacgctctaaatctttgaatgatctgaaaacagcgata
agctatgagaacaatcttaaaatgttaggctcaacccagaatgtggttataaccggaaaa
ggaagtaaaggtggctacataagtagagcaaactcatataaacaggttattgttgaaaat
gctgttattggtagttttagtgaagctaaaataatcgatgcgaaaagcacttatcttatg
gggaatcttatacattaa
DBGET
integrated database retrieval system
