Methanocella conradii: Mtc_1534
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Entry
Mtc_1534 CDS
T01774
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase, subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mez
Methanocella conradii
Pathway
mez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mtc_1534 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mez03021
]
Mtc_1534 (rpoD)
Enzymes [BR:
mez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mtc_1534 (rpoD)
Transcription machinery [BR:
mez03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mtc_1534 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4
Fer4_7
Fer4_9
Fer4_10
Fer4_16
Fer4_21
Fer4_6
Fer4_8
Fer4_4
Fer4_2
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AFD00286
UniProt:
H8I735
LinkDB
All DBs
Position
1457520..1458308
Genome browser
AA seq
262 aa
AA seq
DB search
MKLEILDLGDRKARFILSGVTPAFSNALRRAMLADIPKMAIDYVDIYDNTSVMFDEMLAH
RLGLIPLKTNLNMYKLKEECDCKGAGCALCQVTFTLSAEGPCMVHSRDLKSSDPETVPAD
DNIPIIELKEGQKLVLTAVARLGHGKEHAKFQPVCPPGYKYVPIIEISEKCDSCKQCVEA
CPRGVFAVDKNKVVVVSPYECSMCELCMEACDINAIKVSADNTAFIFSVETDGSFSAGEV
VTRAADAIRAKAVALGEVMESL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgagatcctggatctcggcgaccggaaggccaggttcatcctctcaggggtt
accccggccttctcgaacgccttgaggcgcgcgatgcttgccgacatccccaagatggcc
atcgactacgtcgacatctacgataacacctcggtcatgttcgatgagatgctcgcccac
cggcttgggctgataccccttaagactaacctcaacatgtataagctcaaggaggagtgc
gattgtaagggggcgggctgtgccctctgccaggtgaccttcacgctttctgccgaaggc
ccctgcatggtgcactcgagggacctgaagtcgtctgacccggagaccgttccagcggac
gataacatccccataatagagcttaaggaggggcagaagctggtcttgacagcggttgcc
aggctggggcatggcaaggagcacgccaagttccagcccgtgtgcccgcccggctataaa
tacgttccaatcatcgaaatttccgagaagtgtgactcttgtaagcagtgcgttgaggcc
tgtccgagaggagtcttcgcggtcgataagaataaggtggtcgtcgtgagcccctatgag
tgctccatgtgtgagctgtgtatggaggcgtgtgacattaatgccatcaaggtgtcggcc
gataacaccgctttcatattttccgtggagacggatggctcctttagcgctggcgaggtc
gtcacccgcgccgcggatgcaataagggctaaggccgttgccctcggcgaggtcatggaa
agcctgtaa
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