Methanocella conradii: Mtc_2144
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Entry
Mtc_2144 CDS
T01774
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase, subunit B'
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mez
Methanocella conradii
Pathway
mez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mtc_2144 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mez03021
]
Mtc_2144 (rpoB1)
Enzymes [BR:
mez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mtc_2144 (rpoB1)
Transcription machinery [BR:
mez03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mtc_2144 (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
DnaI_N
Motif
Other DBs
NCBI-ProteinID:
AFD00882
UniProt:
H8I864
LinkDB
All DBs
Position
2040902..2042446
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AA seq
514 aa
AA seq
DB search
MLDRRELSKAYFTRKKIAQHHIDSFNVFLDQGLQKVIDEQGYIETDIEDVERNIEPVKVK
LGKIRVGNPVVREADGSVEPLFPTEARLRNITYAAELFLEMSIVRGEVEEEAIEVNIGQL
PIMIGCKQCNLANLSPEEWVKNGEDPMDPGGYFIINGTERVLMTLEDLAPNKIMVEYDDR
YGDQIEVAKVFSQRRGYRALVIVERGRKSILEVSFPSISGRLNLVMLMRALGLETDQDII
NAVSEDPEIQKFMLENLDEAEADTVESAMEKIGKRVAAGQARDYQMKRAHYVIDRYLLPH
LNPENFERIHEDDPKLKESRINKAYFLGRMAEACCELALHRRAPDDKDHYANKRLKLAGD
LMEDLFRVAFNRLTRDIKYQLERANMRNRELYMITAVRADVLTERLIHPLATGNWVGGRT
GVSQLMDRIDYMAMLSHLRRVISPLSRAQPHFEARDLHATQWGRICPSETPEGPNCGLVK
NFAMSVELSTGIEDEESIKKILREAGVQPLGRVV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgttagacagaagagagttaagcaaggcgtattttacccggaaaaagatcgcacagcat
cacattgactcttttaacgtgtttttagaccaggggcttcagaaggtcatcgatgagcag
ggctacatcgagaccgacattgaggacgtggagcgcaacattgagccagtgaaggtcaag
ctgggcaagatacgcgtggggaatcccgtggtccgtgaggctgatggctcggtggagccg
ctattccccaccgaggcccgattgaggaacatcacctatgcggccgaattgttcttagag
atgagcatagttaggggcgaggtcgaggaggaggccatcgaggtcaacatcggccagctc
cccatcatgataggctgtaagcagtgtaaccttgcgaatctgagccccgaagaatgggtc
aagaatggggaagaccccatggacccgggcggctactttataattaatggtaccgagcgc
gtcttaatgactctagaggacctggcgcctaataagataatggtggagtacgacgaccgc
tatggagaccagatagaggtggccaaggtattctcccagaggcggggctacagggcgctc
gtgatagtcgagagggggcgcaagtccatccttgaggtgtcattcccatcgatatccggc
cgcctgaaccttgtcatgctcatgagggcgctggggctcgagaccgaccaggacatcata
aacgcggtgtccgaggacccagagatacagaagttcatgctcgagaacctcgatgaggcg
gaggcggacaccgtggaaagcgccatggaaaagataggcaagcgcgtggcggcgggccag
gctcgggactaccagatgaagcgcgcccactacgtcatagacaggtacctgctgccgcac
cttaaccccgaaaacttcgagcgcatccatgaggacgacccgaagctcaaggagtccagg
atcaataaggcttactttttgggcaggatggccgaggcctgctgcgagctggccctccac
cgcagggcgccggatgacaaggaccattatgctaataagaggctcaagctggcaggcgac
cttatggaggacttgttcagggtagcgttcaacaggcttaccagagacatcaagtaccag
ctagagcgggcgaacatgcgcaacagggagctatacatgataactgcggtgagggccgac
gtcttgaccgaaaggctcatccacccgctcgcgaccggcaactgggtcggcggaaggacg
ggcgtgtcccagcttatggaccgcatagactacatggccatgctatcgcacctcaggcgt
gtcatatctcccttatccagggcccagccccacttcgaggcccgtgaccttcacgcgact
cagtggggccgcatttgcccgtcggagacgccagaaggcccgaactgcggcctggtgaag
aacttcgccatgtcggtggagctgtccacgggcatagaggacgaggagtcgataaagaag
atactgagagaggccggcgtacagcctctggggagggtggtgtaa
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