Methanobacterium formicicum BRM9: BRM9_0310
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Entry
BRM9_0310 CDS
T03396
Symbol
polB1
Name
(GenBank) DNA polymerase family B PolB1
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRM9_0310 (polB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfc03032
]
BRM9_0310 (polB1)
Enzymes [BR:
mfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRM9_0310 (polB1)
DNA replication proteins [BR:
mfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
BRM9_0310 (polB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
DNA_pol_B_2
Engrail_1_C_sig
Motif
Other DBs
NCBI-ProteinID:
AIS31137
UniProt:
A0A089ZAT3
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All DBs
Position
324343..326214
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AA seq
623 aa
AA seq
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MGVREGIPNGTVTKKFVLLDIDYITRNRVPVIRLFGKVLGEEEGHIIAWDKSFKPYIYVI
PQDIKACTRDLSELGLHSVEKVYQKDQGKRKEVLKVTFKHPQDIPKLRDKIGNLTSVQEV
REHDIPFYRRYLIDKGLSPLNAVEVEGKVLKHGSAKGSPTTPRPCIFQVKSPPTVLPEAF
LPEFSVLSFDIEVYNPRGMPQAELDPIIMISFSSNRGLQKVISYKNLPSASQNSPDSYLG
PPEDFVEVVANEKELLEKFVETVQSENPDFIMGYNSDAFDLPYIMDRAAKLGVPLHLGID
GSTPRFTRMGFSNATMIRGRVHIDLYSYVRRYLHLERHTLERVYLELFGQEKYDLPGDEI
HLYWDKGDQRLERLFHYSLDDAVAVTQIGEEMLPVSMELTRIVGQPLFDVSRMASGQQVE
WYLIRKSFETGNLVPNRPSHEELTQREGKQVVGGYVKEPITGLHENIVYFDFRSLYPSII
ISKNISPDTFTPDYKRGTCHVCPEYGHKFHKEPVGFIPAAMGKILKDRIRIKSRMKQSRD
DKERQILNAQQEALKRLANTFYGLYNHSTFRWYSLQCSESITAWGRDFLKKTMKDAENNG
FKPVYADTDGFFATYNGFKVEVN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtacgtgaaggaatacctaacggtacagtgactaaaaaattcgttctcctggac
attgattacatcacccggaaccgtgtaccagttataaggttattcggcaaagtcctggga
gaagaagaaggccatatcatagcgtgggataagagtttcaaaccctacatctacgtcatc
ccccaagatattaaggcctgcacccgggacttaagtgaactaggacttcactctgtggaa
aaggtttaccaaaaggatcaggggaaaaggaaagaggtcctgaaggtaaccttcaaacat
ccccaggatattcctaaattaagggataagatcgggaatttaacctcggtccaggaggta
agagaacatgatattcctttttaccgcagataccttatagataaaggattatctcctttg
aatgccgtggaagtagaaggcaaagtcttaaaacatggatcggcaaagggatcaccaact
acaccccgaccctgtattttccaggtgaaaagtcctcccacagtccttccagaagcattt
ttaccagaattctcagttttaagctttgatattgaggtctacaatccccggggcatgccc
caggccgagctggaccccatcatcatgatcagtttctccagtaacaggggcctgcagaag
gtgatatcctataaaaatctcccatctgcctctcaaaattccccagattcttatctaggc
cctcctgaagactttgtggaagtagtggccaatgagaaagaattactggagaaatttgtg
gaaactgtccagtctgaaaatcctgattttatcatgggatacaactccgatgcctttgac
cttccctacataatggatcgggcggcaaagctgggagtgcccctccacctgggaatagac
ggatcaacaccccgattcacccgaatgggatttagtaatgccaccatgatccggggtagg
gtgcacattgacctgtactcctatgtccgccgttacctgcacttagaacgccacaccctg
gaacgggtttacctggagctttttggccaggaaaaatacgacctccctggagatgaaatc
cacctttactgggataaaggtgaccagagactggaacgtctcttccactactccctggac
gatgccgtggcagttacccagatcggagaggagatgttaccggtaagcatggaactcacc
cggatcgtgggccaacccctctttgatgtttcccgcatggccagcgggcagcaggtggaa
tggtacctaatccggaaatcttttgaaaccgggaatttagtacctaaccgaccttcacat
gaggaattaacccagagggaaggtaaacaggtggtgggaggctacgttaaagaaccaata
actggtctccacgagaatatcgtctactttgatttccggagcctgtaccccagtataata
atttccaagaacatctccccggataccttcactcctgattataagcggggaacttgccat
gtttgtccggagtatgggcacaaattccacaaggaaccagtaggcttcatcccggcggcc
atgggtaaaatcttaaaggatagaataagaatcaaatcccggatgaaacagtccagggat
gataaagaacgacagatactaaatgcacagcaggaagcattgaagagactagccaacaca
ttctatggattgtacaaccacagcaccttccggtggtacagtctgcaatgttcagagtcc
ataaccgcctgggggagagattttcttaagaaaaccatgaaagatgcggaaaataatggt
tttaaaccagtatacgctgatactgatgggttttttgccacttacaacgggttcaaagtg
gaagtcaactaa
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