Methanobacterium formicicum BRM9: BRM9_0608
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Entry
BRM9_0608 CDS
T03396
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E' RpoE1
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRM9_0608 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfc03021
]
BRM9_0608 (rpoE1)
Enzymes [BR:
mfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRM9_0608 (rpoE1)
Transcription machinery [BR:
mfc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BRM9_0608 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
AIS31431
UniProt:
A0A090JU33
LinkDB
All DBs
Position
616582..617166
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AA seq
194 aa
AA seq
DB search
MYLISKIEDTVRIPPHRFEEPLNEVASEIINESYVGKIDKKMGLMVTVKDIEEIGVGKVI
MGDGAAYHEVVFNALFFKPDLHEVVEGEVIEVTEFGAFIRIGPMDGLVHVSQVTDDYINY
DGKRGALIGKESKKTLEEGNKVRARIVALSLKGKSSKETKIGLTMRQPNLGRVEWIEAEK
EKRAKKGKGKKEKK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttaatatccaaaatagaggacacagtgagaatcccaccccaccgctttgaagaa
cctctaaatgaagtggccagtgaaattatcaacgaaagttacgtgggtaagatcgataaa
aaaatgggattgatggtcactgtcaaggacatagaagaaataggtgtgggcaaagtcata
atgggtgacggagctgcctaccacgaagtggtattcaatgcactgttcttcaaacccgac
ttacatgaagttgtagaaggagaagttatcgaagtaacggaattcggcgcatttatacgc
atcggacccatggatggattggtacacgtatcccaggttactgatgactacataaactac
gatggaaaaagaggggctttaataggtaaagaatccaaaaagaccctggaagaaggcaac
aaagtgcgggccagaatagtggccctcagtctaaagggtaaatcttccaaggaaaccaaa
atcggtctcaccatgagacaacccaacctgggacgggtggaatggatcgaagctgagaaa
gaaaaaagagccaaaaaaggcaaaggtaaaaaggagaaaaagtaa
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