Candidatus Methylacidiphilum fumarolicum: MFUM_2416
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Entry
MFUM_2416 CDS
T09357
Symbol
ydbK
Name
(GenBank) putative pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Pathway
mfh00010
Glycolysis / Gluconeogenesis
mfh00020
Citrate cycle (TCA cycle)
mfh00620
Pyruvate metabolism
mfh00650
Butanoate metabolism
mfh01100
Metabolic pathways
mfh01110
Biosynthesis of secondary metabolites
mfh01120
Microbial metabolism in diverse environments
mfh01200
Carbon metabolism
mfh01210
2-Oxocarboxylic acid metabolism
Module
mfh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MFUM_2416 (ydbK)
00020 Citrate cycle (TCA cycle)
MFUM_2416 (ydbK)
00620 Pyruvate metabolism
MFUM_2416 (ydbK)
00650 Butanoate metabolism
MFUM_2416 (ydbK)
Enzymes [BR:
mfh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
MFUM_2416 (ydbK)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
TPP_enzyme_C
Fer4_6
PFOR_II
Fer4_7
Fer4
Fer4_21
Fer4_9
Fer4_2
Fer4_16
Fer4_10
Fer4_17
Fer4_4
Fer4_8
Transketolase_C
Fer4_15
Fer4_13
Fer4_18
MCR_beta
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
CAI9086722
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All DBs
Position
MFUM:complement(2382767..2386315)
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AA seq
1182 aa
AA seq
DB search
MAGGLCRTVDANEAVARIAYLLSEVIAIYPITPSSPMGEWVDKWRAERKTNLWGLLPQVV
EMQSEGGVAGALHGALLTGSLASTFTASQGLLLMLPNMYKMAGELLPAVFHVASRTIATH
ALSIFGDHSDVMAARTTGFALLCSHSVQEAADLALIAHLSSLEASLPFLHFFDGFRTSHE
INTIKQIEEGQIKELISVEAILKFRQRGLNPERPLLYGSSQNPDVFFQARERANPFYLAC
PGIVQNVMDRVGALTGRHYKLFEYHGDPQATMVVVVMGSASETLCRVVDSLNSLGYKTGV
VKVRLFSPFDQQSFLKCFPRTTKIIGVLDRCKEPGSVGEPLFVQVASAILNNVDKSWFPF
LDLPRVIGGRYGLSSKEFTPAMAKAVFDHLSKEDPKGSFTVGIEDDLTQSSIAVNESFTI
ENKTLYEAVFYGLGSDGTVSANKNTIKIIGENVGLFAQGYFVYDSKKSGSLTISHLRFGS
SPIAAPYLVEKPDFVGCHQFEFLFKYDILKGIKNGGILLVNSPFSPDETWDKIPREVQQK
ILSERIQFFVIDAYKIAKDCGLGSRINTIMQIAFFELTALIPIDEALDYLREHIRSSYGY
RGEEVVRKNFEALEKALKALCRVKLDGKSLGSVPLLPPVSEEAPEYVKSVIGEMIALRGD
RLPVSAFSPFGAFPTATSQWEKRNISLEVPLWEPSLCIQCGKCVIACPHAVLRAKVYDPT
FVEKAPEGFLKADARYPEWDGLLYTIAVSEADCTGCGICVDVCPAFDKYSPGKKAIHMIS
RRELFTKTKESFFEYFQRIPDVEKEKIDFGSVRQVALLRPLFEFPGACAGCGETPYLKLL
SQLFGDRLLIANATGCSSIYGGNLPTTPWAKDNDGRGPAWANSLFEDNAEFGLGFRLGLD
AIGQWARKFLVQFGESGLVDKNLVQELINVEEKTTKEYSDQRKRIKFLKERLEALKLPES
KIFLTAADYLSKKSVWIVGGDGWAYDIGLGGLIHVLALNFNVKILVLDTEVYSNTGGQAS
KATPRGAVAKFATSGKSTPKMDLALMAISLGNVYVASVSIGADEEHTLSAFTEADAFEGP
SLILAYSHCIAHGIDMSKAMHHQKSVVGSGRWPIFRYNPKGYPDGKRLKLDWDKQVSDLE
KSELMENRFRMLFLSDPEKAEELLALAISDCRNHLDSYKKIG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggtttatgcagaacagtcgacgccaatgaggcggttgcaagaattgcttat
cttctgagcgaagtgatagccatctatcccataactccatcttcgcctatgggagagtgg
gtagataaatggagagcagaaagaaaaacaaacctatggggacttcttcctcaggttgtt
gaaatgcaaagtgagggtggagtggctggagcattacatggtgcactcctaactggcagc
cttgcttcaacttttactgcttcccaaggacttttattaatgttgcccaatatgtacaag
atggcaggggaactgcttcctgcagtctttcatgttgcttctagaaccattgctacccat
gcgttatccatttttggtgatcatagtgatgtcatggctgctcgaactacaggatttgct
ctcttatgctcccattctgtgcaagaggctgcagatttggcactcattgcccatctctcc
tctttagaagcctctttaccttttcttcatttttttgatggctttcgaaccagtcatgaa
atcaacaccattaagcaaatagaagaggggcaaatcaaagagcttatttctgttgaggca
attttgaagtttagacagcgtggactcaatcccgaaaggccactgctttatggaagctct
caaaaccccgatgtgttttttcaagctagggaaagagctaatccattttacttggcatgt
cctgggatagtgcaaaacgtaatggatagagtgggggctctcacagggcgtcactataag
ttatttgaatatcatggggatccccaggcaacaatggttgtggttgtgatgggatcggct
tcagaaaccctttgtcgagttgtagatagcttaaattctctaggctataaaactggagtc
gttaaagttagattgtttagtccttttgaccaacaaagttttttaaagtgcttccctcga
accacgaagattattggggtgctggataggtgcaaagagccaggctctgtgggcgaacca
ctttttgtgcaggttgcttcggccatattaaataacgtagacaaaagttggtttccattc
ttggatctgcctcgagtcataggaggcagatatgggctatcatccaaagagtttacccca
gcgatggcaaaagcggtatttgatcacctttcgaaagaggatcctaagggatcatttaca
gtggggattgaagatgatctcactcagagcagcattgctgtcaatgaatcctttactata
gaaaacaaaactctctatgaagcggtattttatggattaggttctgatgggacggtaagt
gctaataaaaatacgatcaaaattattggtgaaaatgtaggtctttttgctcaaggatat
tttgtctatgattctaaaaagtctggttccttgacgatttcacacttgcgatttggatcc
agccccattgctgcaccctatttagtggaaaaacccgattttgtgggctgtcatcagttc
gaatttctttttaaatatgatatcctcaagggcattaaaaatgggggcattttgttagtg
aatagcccttttagtcctgatgaaacctgggataagattccgagggaagtccagcagaaa
atattatcagagcgtatccaattttttgttatagacgcctacaagatcgctaaagactgc
ggcttgggaagcaggataaacacgatcatgcaaatagctttttttgagcttaccgcactc
attccaattgacgaggccttggattatctcagagaacatattcgtagcagttatggatat
cggggagaggaagtggttagaaaaaatttcgaggctttagaaaaggcattaaaagctctc
tgtagagttaaactagatggaaaaagccttggttctgttccgctgctacctccggtttct
gaagaggcgcctgaatatgtgaaaagtgtcattggagaaatgatcgcattgcgtggcgac
agacttcctgtcagtgctttttctccttttggtgcttttcctacggcaacctctcagtgg
gaaaaacgtaatatttcccttgaggtacctctttgggaaccatccctttgtattcaatgc
ggtaagtgtgtcattgcatgtcctcatgcggtgctgcgggctaaagtttatgatccgaca
tttgttgaaaaagctccagaaggttttttaaaagcggatgcaagataccctgaatgggat
ggtttactctacaccattgctgtttcagaagccgattgtacgggctgtggaatatgtgta
gacgtgtgcccagcatttgataagtactctccgggcaaaaaggcaatacatatgataagc
cgtagggagctttttactaaaactaaagagagtttttttgaatatttccaaagaattcca
gacgttgagaaagaaaaaattgactttggatctgtaagacaagtggctcttttgcgtccg
ttattcgaatttccgggagcctgtgctggatgtggggaaacaccttacttgaaattatta
agccaactctttggggataggctgcttattgccaatgctactggttgctcctcgatatat
ggcggcaacttacctactactccttgggcaaaagacaacgatggcagaggacctgcttgg
gcaaattcactatttgaagacaacgcggaatttggtcttggctttcgtctaggattggat
gcgatcggtcagtgggctcgcaagtttttagtccagtttggagaaagtggtttggtagat
aaaaatctagttcaagaattgattaatgtcgaagagaagacgacaaaggaatattcagat
caaagaaagcggattaagtttctcaaggaaagattggaggcattgaaacttccggaatcg
aaaatatttttgacagcggctgattatctttcaaaaaaaagcgtgtggattgtaggagga
gatgggtgggcttatgatattggactaggaggactaatccatgtcctagccttaaatttc
aacgttaaaatattggtattggatacagaagtttattccaatacagggggacaagcttcg
aaagcaaccccaaggggagcagtggcaaaatttgcgacttctggcaaatcaactcccaaa
atggatcttgcccttatggcaatatccttgggtaatgtgtatgtagcttcggtctccatt
ggcgccgatgaagagcatacgcttagtgcttttacagaagccgatgcttttgaaggtcca
agccttatcttggcttattctcattgtattgctcatggtattgacatgtccaaggcaatg
caccatcaaaaatcggttgtcggttcaggacgttggccaatttttcgttataatccaaaa
ggttatccagatgggaaacgccttaaattagattgggacaaacaagtaagtgatcttgaa
aaatctgaacttatggaaaataggtttagaatgctttttttaagcgatccagagaaggcc
gaagaactactagcactggctatttccgattgtcggaatcatctcgattcttacaaaaag
atcggttaa
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