Methanobacterium formicicum DSM1535: DSM1535_1478
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Entry
DSM1535_1478 CDS
T03743
Symbol
lysS
Name
(GenBank) Lysine-tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSM1535_1478 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mfi01007
]
DSM1535_1478 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfi03016
]
DSM1535_1478 (lysS)
Enzymes [BR:
mfi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DSM1535_1478 (lysS)
Amino acid related enzymes [BR:
mfi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
DSM1535_1478 (lysS)
Transfer RNA biogenesis [BR:
mfi03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSM1535_1478 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
CEA13811
UniProt:
A0A090JWA7
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Position
complement(1476038..1477615)
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AA seq
525 aa
AA seq
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MKHWTERIASDLSNWDVEKHVVASGTSISGSIHIGNSCDVFIANAVGKALQKLGEDSQTI
WIADDHDPLRKVPYPLPESYEKYLGVPYSQIPCPEGCCQNFVEHFEKPFLETLPIFGIEL
ETYSGFKMYQDGIYNDYIKKSLERAPRIREIFNQYREHPLADDWLPYNPICSECGRVNTT
TAYDYQGDTLYYRCQCGHEGEMNIKSGNGKLTWRVEWAARWKIFGVTCEPFGKDHAASGG
SYDVSKVVSQEIFDYRAPYPVPYEWITLKGDAMSKSKGVFFTPGQWLEIGAPETLNYFLF
RSKPLKHKDFDPGMPFLDFIDQYDRVERIYYDVEEAASEKESEKLKKIYQASQINPVESM
PFQTSYRFLTVARQITDDPEKIFAILKRNSQLSADIQGKEYANLDPEAKAQLGSRLENVQ
NWLEKYAPEFVKFSVQETMPSVQLNETQDVFLLQVADLLEKKDYTSSQEFHDEMYNLLNE
LGLKPQKAFQAIYKMIIGKKQGPRAASFVLSLDKDFVIKRFRKEA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacactggactgaacgaattgcatctgatctaagtaactgggacgttgaaaaacac
gttgttgccagtggaacctctatttccggttctatacatattggaaattcctgtgacgtt
tttatagccaatgccgttggtaaagccctccagaaactgggggaagattcccagaccatc
tggatcgccgatgaccacgaccccctgaggaaggtgccttacccacttcctgaatcatac
gagaaatacctgggtgttccttactcccagatcccctgtcctgagggttgttgccagaac
ttcgtggaacactttgagaaaccattcctggaaactctgcccatatttgggatagaactt
gaaacctattccggttttaaaatgtaccaggacggaatttacaacgattacattaaaaaa
tcactggaaagagccccccggatccgggaaatattcaaccagtaccgtgaacaccccctg
gctgatgactggttaccctacaaccccatctgcagtgaatgtggacgggtgaacaccacc
actgcctacgattatcagggagacaccctttactaccggtgccagtgcggtcatgaaggc
gaaatgaacatcaaatcaggtaacgggaagctcacctggcgtgtggaatgggcagcccgg
tggaagatcttcggtgtgacctgcgaaccatttggaaaggaccacgctgccagtggagga
tcctacgatgtgagtaaagttgtatcccaggagatattcgactaccgagcaccttaccct
gtcccctatgaatggatcaccctcaaaggcgatgccatgagcaaatccaaaggtgttttc
ttcacccccggacagtggctggaaataggagccccagaaaccctaaattacttcttattc
cgcagtaaacccctaaaacataaggatttcgacccgggaatgccatttttagacttcatt
gaccagtacgaccgggtggagaggatctactacgatgtggaagaagcagcctccgagaag
gaaagtgaaaaactcaagaaaatctaccaggcctcccagatcaacccggtagaatccatg
cccttccagacatcctaccgtttccttactgtagcccggcagataaccgatgaccctgag
aagatcttcgccatacttaaacgaaactcccagctgagtgcagacatacagggaaaagaa
tatgccaacctagatcccgaagccaaggcccaactgggatcacgtctagaaaatgtgcag
aactggctggaaaagtacgctccggaatttgttaaattcagtgtacaggaaacaatgccc
tctgttcagttaaacgaaacacaagatgtattcctgcttcaagtggcagacctcctggag
aaaaaggattacacttcttcccaggaattccacgatgaaatgtacaatttactgaatgaa
ctgggactaaaaccacagaaggcattccaggccatttacaaaatgattattggtaaaaaa
cagggcccccgagctgcttcatttgttctgtcactggataaagattttgttataaaaaga
ttccggaaagaggcttaa
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