Methanoregula formicica: Metfor_2004
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Entry
Metfor_2004 CDS
T02392
Name
(GenBank) thiazole biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mfo
Methanoregula formicica
Pathway
mfo00730
Thiamine metabolism
mfo01100
Metabolic pathways
mfo01240
Biosynthesis of cofactors
mfo04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Metfor_2004
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Metfor_2004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_2004
Enzymes [BR:
mfo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Metfor_2004
Transfer RNA biogenesis [BR:
mfo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Metfor_2004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AGB03018
UniProt:
L0HI71
LinkDB
All DBs
Position
complement(1953299..1954525)
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AA seq
408 aa
AA seq
DB search
MPKARDHPAQETLVMARYGELFLKSEPVKRHFIGMLLRNIRKTVGAAGIECRYETPRGRI
LIYGGEPEKVAGIVSRVFGIIDVSTCHRTSADLEDLKEAALSRAKKHLSAGMSFAVRAKR
QYKTGLTSQELGTEIGSFIYDNIPGLSVDLDDPDYEVFVEVRDFGGLVYDKRIAGPGGLP
WGTQGRVLVLLSAGIDSPVASWLSMKRGCEITHLYLDAGRWAGTDVTAAAIENHRRLSLW
CSGNPVPLVIADSEPLFDAMSRQKVQPRYRCVICKRFMLRAAARLMAHEGALAVVTGENL
GQVASQTLANLGVVAEAATVPVLRPLITYDKEETIIVARRIGTFDAKPGDLACRAVPKMP
ATSAVLEEVKEIEQRMEIEDLAAAACDGLRFVTALDGTITEDSAAPRE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagcccgcgatcacccggcacaggagaccctcgtcatggcacggtacggggaa
ctcttcttgaagagcgaaccggtgaaacgccatttcatcggcatgctgctgcgcaatatc
aggaaaaccgttggcgccgccggcatcgagtgccggtacgagacaccccggggacggatc
ctgatctatggtggcgagccggagaaggtcgcgggaatcgtgtcgcgggtctttgggatc
atcgatgtgagcacctgccaccgcacatcagcggatcttgaggatctgaaggaggctgca
ctttcgcgggcaaaaaagcatctctcagcgggtatgagttttgccgtccgtgcaaagcgc
cagtacaagaccggcctcacgagccaggaacttggcacggagatcgggtcgttcatctac
gacaacattcccggcctctctgttgaccttgatgatccggactacgaagtctttgttgaa
gtccgggacttcggcgggctcgtgtatgacaagcgcattgccgggccgggcggcctcccg
tggggtacgcaggggcgggtgctcgtcctcctctctgcagggatcgactcccccgttgca
tcctggctctcgatgaaacgcggctgcgagatcacgcatctctatctcgatgccgggcgt
tgggcgggaaccgatgtgacggccgcagcgatcgagaaccaccgcaggctctcgctctgg
tgttccggcaacccggtgccccttgtgatcgcagacagcgaaccgctcttcgatgccatg
agccggcaaaaagtccagccgcggtaccggtgcgtgatctgcaagcggttcatgctgcgg
gcggctgcccggctgatggcccatgaaggcgccctcgcggtggttacgggcgagaacctc
gggcaggtcgcgtcccagacgcttgcgaatcttggtgttgtcgcggaggcggcaactgtc
cccgtactccggccgctcatcacgtacgacaaggaggagaccatcattgttgcccggagg
atcggtacgttcgatgcaaagccgggcgaccttgcctgccgtgccgtgccgaagatgccg
gcaacgagcgccgtgcttgaggaagtgaaggagatcgagcagcggatggagatcgaagac
cttgctgctgcggcctgcgacggcctccggttcgtgacagcactggacggaacgatcacg
gaagactctgccgcaccgcgggagtga
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