Methanoregula formicica: Metfor_2686
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Entry
Metfor_2686 CDS
T02392
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mfo
Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:
mfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfo03016
]
Metfor_2686
Enzymes [BR:
mfo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Metfor_2686
Transfer RNA biogenesis [BR:
mfo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Metfor_2686
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Linocin_M18
Motif
Other DBs
NCBI-ProteinID:
AGB03674
UniProt:
L0HKV4
LinkDB
All DBs
Position
complement(2611791..2613047)
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AA seq
418 aa
AA seq
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MAPGEPQSGDYDNLPPGLCNRRVCIETYGCRYNFGDTAKLTEVLKHRGCSIADSVDDADV
VIVNTCTVVGPTERRMLRRLSALRDRDLFVTGCMPQVQKEAILSVCDPGFIAPDAIQEWY
RRVGTVAAGSVGIVQLAQGCNGTCTYCITRQARGPLRSFPLHEVRRQVAAYAACGAAEIQ
LTAQDVSSYGKDIGLSLAGLLNDIGDPPGSYCIRVGMMNPATVMDDLDAIIDAFSAERIF
RFLHLPVQSGSDTILERMGRQYTVRDFCRIIAAFRKRYPEITVMTDMIAGFPGETEEDFS
ASIDLIRRLRPNKVNVTRYSKRPFTPLSQEKDILDSVKKNRSRIMLSCSEQVYAEVNRPW
LGREVPFIVTETIREGSVMARSPAYQGIVINEDLPVGYEGHAVLRKDRKYFFIGERVT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcacctggtgaaccacaatccggtgactatgataaccttccgcccgggctctgcaac
cggagggtctgtatcgaaacctacgggtgccggtataatttcggggatacggccaaactc
accgaggtattgaaacaccggggctgcagtattgccgattctgtggatgatgccgacgtt
gtcatcgtcaatacctgcacggtggtcgggccgacagagcggcggatgcttcgcaggctc
tcggcgctgcgggaccgggatctctttgttacaggctgcatgcctcaggtccagaaggag
gctatcctctcggtctgcgatcccggtttcattgcaccggatgcaatacaggagtggtac
cgccgggtgggcacggttgccgccggcagtgtggggattgtgcagcttgcacaggggtgc
aacggcacctgtacctattgtatcactcggcaggcacggggcccgctccggagttttccc
ctgcacgaggtccgcaggcaggtggcagcatatgccgcgtgtggtgcagcagagatccaa
ctgacggcccaggatgtcagttcctatggaaaggatatcggcctgtcccttgccggcctg
ctgaacgatattggcgatcccccggggagctactgcatccgtgtcgggatgatgaatcca
gcaacggtcatggacgatctcgatgcgatcattgatgccttctccgcagaaaggatcttt
cgattcctccaccttccggtacagtccggatccgacaccatcctggaacggatgggccgg
cagtatacggtccgggacttctgcaggattatcgccgcattcaggaaacgctacccggag
atcacggtgatgaccgacatgatcgccgggttccccggggaaacggaggaggacttctcc
gcctcgatcgacctcatccgccgcctccggccaaacaaggtgaacgtgacccggtactcg
aaacggcctttcacgcccctctcgcaggaaaaggacatcctagattccgtcaaaaagaat
cgctcccgcatcatgttgtcctgttccgaacaggtctatgcagaggtaaaccggccctgg
cttgggcgggaggtcccgttcattgtcacggaaacgatccgggaaggttccgtcatggcc
cgttccccggcctaccagggcatcgtcatcaatgaggacctgccggtgggatatgaaggg
catgccgtgctcaggaaagaccggaagtactttttcattggtgagcgggtgacctga
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