KEGG   Microtus fortis (reed vole): 126504000
Entry
126504000         CDS       T08493                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
mfot  Microtus fortis (reed vole)
Pathway
mfot01524  Platinum drug resistance
mfot03430  Mismatch repair
mfot05200  Pathways in cancer
mfot05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    126504000
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126504000
  09162 Cancer: specific types
   05210 Colorectal cancer
    126504000
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    126504000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfot03400]
    126504000
DNA repair and recombination proteins [BR:mfot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     126504000
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Arb1
Other DBs
NCBI-GeneID: 126504000
NCBI-ProteinID: XP_050001928
LinkDB
Position
Unknown
AA seq 1358 aa
MSRQSTLYSFFSKSPALGDTKKAAAGALREGGAAAAAVSGASASRGRDAAWSETGSEPRP
AAVSASSPEAKNLNGGPRSSAVPAVPDSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGT
FIRKKGKSVRVHVQFFDDSPTRGWVNKRMLKPYTGSKSKEAQKGGHFYSSKSEILRAMQR
ADEALNKDKMKRLELAVCDEPSEPEEEDETEVQHAAYVSDKSEDNQSESEELQPKVQGPR
RSSRQVKKRRIISDSESDIGGSDVEFKPDTKQEGSSDEMSSGVGDSDSEDLGTFGAPKRK
RAMAGHGAFRRKSSRKETSSATKRATRISSETKSTLNAFSAPQNSESQTHISGGGDNSGP
TIWYHETLEWLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQNFD
LVIFYKVGKFYELYHMDAVIGVSELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVAR
VEQTETPEMMEARCRKMAHVSKFDRVVRREVCRIITKGTQTYSVLEGDPSENYSKYLLSL
KEKEEDSSGHTRVYGVCFVDTSLGKFFMGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLS
TETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEEGYFTGKLNEDSGVALPGVLKRM
TSGSDSIGLTPGENSELALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSKMVTTVRP
GAVFTKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPI
CSPCAISDRLDAVEDLMALPDKITEVTELLKKLPDLERLLSKIHNIGSPLKSQNHPDSRA
IMYEETTYSKKKIIDFLSALEGFKVMCKIIGLMEDVADDFKSKTLKQVVTLQTKSPEGCF
PDLNTELNRWDTAFDHERARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRL
GCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAE
ERRDMSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEILLP
REDRHPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGGKST
LIRQAGLLAVMAQVGCYVPAEVCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILR
HATVHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKNVSV
RLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKARE
FEKTNQSLRLFREVCLASEKPTLDAEAVHRLLALIKEL
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgtcgcgacaaagcaccctgtacagcttcttttccaagtccccggcgcttggcgacacc
aagaaggccgcggccggggccttacgtgaagggggcgccgccgccgccgccgtctccggg
gcctccgcttcccgcggcagggatgcggcctggagcgagactggatccgagccccggccc
gcggcggtgtccgcctcgtcgcccgaggcaaagaacctcaacgggggaccgcggagctcg
gccgtgccggcggttcccgacagttcttgtgacttttcaccaggcgatttggtttgggct
aagatggaaggttatccctggtggccttgcctggtttataatcatccctttgatggaaca
ttcatccggaagaaagggaaatcggttcgtgttcatgtccagttttttgatgacagtcca
acaaggggctgggttaacaaaaggatgttaaagccatatacaggttcaaagtccaaggaa
gcccaaaagggaggtcatttctacagttcaaagtctgaaatcctgagagcaatgcaacgc
gcagatgaagccttaaataaagacaagatgaagaggcttgagttagcagtgtgtgatgag
ccttcagagccagaagaggaggacgagacagaggtgcagcatgcagcttacgtatccgat
aagagtgaagataatcaaagtgaaagtgaagaactgcagcctaaggtgcaggggcctagg
cgaagcagtcggcaagtaaaaaagcgaaggattatatcagattctgagagtgacattggt
ggctctgatgtagaattcaagccagacactaagcaagaaggaagcagcgacgaaatgagc
agtggagttggagacagtgatagtgaggacctagggacctttggtgctccaaagcggaag
agagcaatggctggtcacggtgcatttagaaggaaaagttcaaggaaggaaacatcctca
gccaccaaacgagcaactcgaatttcatcagaaaccaagagtaccttgaatgctttctct
gcccctcagaattctgaatcccaaacccatattagcggaggaggtgacaatagtgggccc
actatttggtatcatgaaactttagaatggcttaagccagaaaagagaagagatgagcac
cggagacgccctgatcaccctgattttaattcttccacactgtatgtgcctgaagatttc
cttaattcctgtactccagggatgaggaagtggtgggagattaagtctcagaactttgat
cttgttattttttataaggtggggaagttttacgaattgtatcacatggatgccgttatt
ggagtcagtgagctgggactagtattcatgaagggcaactgggcccattctggttttcct
gaaattgcatttggccgattttcagattccttggtgcagaagggctataaagtagcacga
gtggaacagactgagactccagaaatgatggaagcacgatgccggaagatggcacacgtg
tctaagtttgacagagtggtgagaagggaggtttgtaggatcatcaccaagggcacacag
acgtacagtgtgctggaaggtgatccctctgagaactacagtaagtaccttctgagcctt
aaagagaaagaggaagattcctctgggcacactcgtgtatatggtgtgtgcttcgttgac
acttcactgggcaagtttttcatgggtcagttttcagatgatcgccattgttccagattt
aggactcttgtggcacactatcctccagtacaaattttgtttgagaaaggaaatctctca
acagaaactaaaacagttctgaaaggttcattgtcctcttgtcttcaggaaggtctgata
ccaggttcccaattttgggatgccaccaagactctgagaacactccttgaagaaggatat
tttactgggaagttaaatgaagacagtggtgtagcactgcctggggtacttaaacgtatg
acctcagggtcagattctattggcctgacaccaggagagaatagtgaattggccctctct
gctctaggtggttgtgttttctacctcaaaaaatgcttgattgatcaggagcttctatca
atggctaattttgaagaatattttcccttggattctaaaatggtcaccacagtaagaccc
ggtgctgtctttactaaagccaatcagcgaatggtgctagatgcagtgacattaaacaac
ttggagattttcctgaatgggacaaatggttctactgaagggactttgctagagaggctt
gatacttgtcatactccctttggcaagcggctcctaaaacaatggctttgtgcccccatc
tgtagtccttgcgctataagtgaccgcttagatgctgtggaagacctgatggctttgcct
gacaaaatcactgaagttacagaactcctaaagaagctaccagatcttgagaggctactg
agtaagatccataatattggatctcccctaaaaagccagaaccacccagacagcagggct
ataatgtacgaagaaaccacatacagcaaaaaaaagatcattgattttctttctgctcta
gaaggattcaaagtaatgtgtaagattatagggcttatggaggatgttgctgatgatttt
aagtctaaaacccttaagcaggttgtcactctacagacaaaaagtcctgaaggctgtttt
cctgatctgaacacagagctgaaccgatgggatactgcttttgaccacgagagggctcga
aagactggactcattactccaaaggcaggatttgactctgattatgaccaagcacttgct
gacataagagagaatgaacagagtctcctggagtacttagataaacagcgcagtcggctt
ggatgcaggaccatagtctactggggaattggtaggaaccgttaccagttggagattcca
gagaattttactacccgcaacctaccagaagaatatgagttgaaatctactaaaaagggc
tgtaaacgatactggaccaaaacgattgagaagaagttagctaatcttataaatgctgaa
gaacgtagggacatgtctttgaaggactgcatgaggcggctgttctataactttgataaa
aattacaaggactggcagtctgctgtagagtgcattgcagtattggatgtcttactgtgc
ttggctaactatagtcaaggaggagatggtcccatgtgtcgcccagaaattctattaccg
agagaagacagacaccccttcctagagcttaaagggtcacggcatccctgcattaccaag
actttttttggagatgattttattcctaatgacatcctgataggctgtgaagaagaagaa
gaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaaatctaca
ctcataagacaggctggtctattggctgtaatggcccaggtgggttgttatgtacctgct
gaagtgtgtcggctcacaccagtagatagagtgtttactagacttggtgcctcagatagg
ataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagcatacttagg
catgcaacagtacattctttggtgcttgtggatgagttaggaagaggtactgcaactttt
gatgggacagcaatagccaatgcagttgttaaagaacttgctgaaaccataaagtgtcga
acattgttttctacacactatcattcattagtagaagactattctaaaaatgtttctgtg
cgcctaggacacatggcttgcatggtagaaaatgaatgtgaggatcccagccaggagact
attaccttcctctataaattcattaagggagcctgtcccaagagctacggctttaatgca
gcaaggcttgctaatcttccggaggaggttattcaaaagggacacagaaaagcaagagaa
tttgagaagacgaatcagtcattacgactatttcgggaagtttgtctggctagtgaaaag
ccaactctagatgctgaagctgtccataggttgctggctttgattaaggaattgtag

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