Megamonas funiformis: GXM21_01660
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Entry
GXM21_01660 CDS
T06475
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mfun
Megamonas funiformis
Pathway
mfun03030
DNA replication
mfun03430
Mismatch repair
mfun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GXM21_01660
03430 Mismatch repair
GXM21_01660
03440 Homologous recombination
GXM21_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfun03032
]
GXM21_01660
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_01660
Enzymes [BR:
mfun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GXM21_01660
DNA replication proteins [BR:
mfun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GXM21_01660
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GXM21_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol3_a_NII
COA2
T2SSK
Rubredoxin
Motif
Other DBs
NCBI-ProteinID:
QIB59153
LinkDB
All DBs
Position
complement(351470..355237)
Genome browser
AA seq
1255 aa
AA seq
DB search
MTKKYLILPQNGGDKFRQLLASMPGTAQEQKIMQEATIKHVEIDVNNNSWEILMQTYNGI
PDELLAKASSYISQKCNIPTVIFYQDIVDLPQEVARHWSIIVQNAANGNPTLFSILNQAS
HSVDGNKIMIDFKGDHIEDILRSHNIEETISQAVQAMVHCPCHVICRIDSQQQPAINNTL
ADFDPESYLRQLQQQAKTQNHTVSKNNTPPPPANNADNPAPKFRRKSERKLMIDNIPEEH
IEITSIDGEMKNIVLRGRIFNINNREFNTGTNLLTFDLADESDGISCKVFLKNKDDFEEV
MSALKKADIIKIKGSIRFDSYLNDYVMMPLNICLSELPKREDRAIEKRVELHAHTHMSNM
DAVVSAKELISTAARWGWPAIAITDHGVVQAFPEAMKAAKDNKIKVIYGIEGYLTGDDYQ
QRRANHIIMLAKNSIGLRNIYRMVSLSHLKYLYKSRPRLPKKIISELREGVIIGSACEAG
ELIRAIVNNESDEKLLEIASFYDYLEIQPIGNNAFLIRNENFPDVQTDEDLIKINLKVAE
LAKKLNKMLIATCDVHFLNAKDSIYRAILMKGKGFEDAEKQPPLYLRTTDEMLKEFSYLG
EELAYEAVVTNPRKIADMVEVFKPIPDELYSPMIPGADQEIHDMSYAKARELYGENLPKV
VQDRLELELNSIIGHGFAVLYLIAHKLVKKSLDDGYLVGSRGSVGSSFVATMTNITEVNP
LPPHWRCPHCRHSEFIEDGTYGCGFDMPDKDCPHCGTKMIKDGHDIPFAVFMGFDGDKVP
DIDLNFSGDYQPVAHKYTEELFGKDNVFRAGTIATVADKTAYGYVKKFFDEKGIKKRDAY
INSLVNGCTGVKRTTGQHPGGIMVIPRNMDVHHFTPIQRPADDTTTNTITTHFDYHSISS
RLVKLDILGHDDPTVIKMLENITHRDPRTIPFDDPATMSIFSSTEALGVTPEELGATSGT
FGIPEFRTPFTRQMLDDTKPKKFSDLVRISGFSHGTNVWLENAQDLITSGTCTVSDAISC
RDDIMMHLIHSGIDPLFSFKTMEKVRKGKGLSEDDIKVMKDGGIPQWYIDSCLKIKYLFP
RAHATAYVMMAYRIAFCKVHYPLAFYAAYFSIRAAEFDADIISKGKLAVRDKLDEIIELE
KQKKLSVKDKGFQVVLELAWEMYLRGFSVEKVDLYKSNADKFILHEKSLLPPFTALTGIS
TMAANNIVQARLEGEFTSIDDLKKRASLSTPIVERLREHGCLDGLQESDQISLFS
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaatatcttattttacctcaaaatggtggcgataaatttcgtcagcttctt
gcttctatgcccggaacagctcaagaacaaaaaatcatgcaagaagctactattaaacat
gtagaaattgatgtaaataacaattcatgggaaatcctcatgcaaacttataatggtata
cctgatgaattattagctaaagcttcatcatatatctcgcaaaaatgcaatattcccact
gtaattttttatcaagatattgtggacttgccacaagaagtagcccgccattggtctatc
attgttcaaaatgcagctaatggtaaccctactttattttccattttaaaccaagctagt
catagcgttgatggcaataaaatcatgatagatttcaaaggcgaccatattgaagatatt
ttacgctctcataatattgaagaaactatatctcaagctgttcaagctatggtacattgc
ccttgtcatgttatctgtcgcattgatagtcaacaacaacctgcaataaataatacttta
gctgattttgaccctgaatcttatcttcgtcaacttcaacaacaagctaaaacacaaaac
catacagtcagcaaaaataatacaccgccaccacctgctaataatgcagataaccctgca
ccaaaattccgtcgcaaaagtgaacgcaaattaatgattgataacattcctgaagaacat
attgaaatcactagcattgatggcgaaatgaaaaatatcgttttacgcggtcgcattttc
aatatcaataatcgtgaattcaatacaggaactaatcttctaacttttgatctagcagat
gaatctgacggtatttcttgtaaagtattcttaaaaaataaagatgactttgaagaagta
atgtctgctctaaaaaaagctgatattatcaaaataaaaggctctatccgttttgactct
tatctcaatgattatgtaatgatgccacttaatatctgtttgtctgaattaccaaaaaga
gaagatagagctatcgaaaaacgcgtagaactacacgcacatacacatatgagcaatatg
gacgctgttgtatcagcaaaagaattgatatctactgccgctcgttggggctggcctgct
atcgctatcactgaccatggtgtcgttcaagccttcccagaagcgatgaaagctgccaaa
gataataaaataaaagtaatctatggtattgaaggatatctgacaggcgatgattatcaa
cagcgcagagctaatcacatcatcatgttagccaaaaattctatcggtcttagaaatatt
tatcgaatggtctccttatctcatttgaaatatctctataaatcaagacctagattaccg
aaaaaaatcatctctgaattgcgtgaaggtgtaatcatcggttcggcttgtgaagcaggt
gaattaatcagagctattgtaaataatgaaagcgatgaaaaattattagaaatagctagt
ttttatgattatcttgaaattcaacccatcggcaataatgcctttttaatccgcaacgaa
aatttccctgatgtacaaactgatgaagacttaataaaaatcaatttaaaagttgctgag
cttgctaaaaaattaaataaaatgctcatagcgacttgtgatgttcatttcttaaatgcc
aaggatagtatttatcgtgctattttaatgaaaggcaaaggttttgaagatgcggaaaaa
caaccgccattatatcttcgcacaactgatgaaatgctcaaagaatttagctatttaggc
gaagaattagcctatgaagcagtcgttaccaacccacgcaaaatagcagatatggtagaa
gtcttcaagcctattcctgatgaattatattcacctatgataccaggagctgaccaagaa
attcacgatatgtcatatgccaaagctcgtgaattatacggtgaaaatctgcctaaagta
gtacaagaccgcttagaattagaattaaattccatcattggtcatggttttgccgtgctt
tatttaatcgctcataaactcgtaaaaaaatcacttgatgatggctatcttgttggttct
aggggttcagttggttcttcctttgtcgctactatgacgaatataacagaagtaaatcct
ctaccaccacattggcgctgtcctcattgtcgccacagcgaatttattgaagatggtact
tatggttgtggttttgatatgccagataaagattgccctcattgcggaactaaaatgatt
aaagatggccatgatattccatttgctgtattcatgggatttgacggcgataaagttcct
gatattgacttgaatttctctggtgattatcaaccagtagctcataaatacactgaagaa
ttattcggcaaagataatgttttccgtgcaggaactatcgccactgtagctgataaaact
gcttatggttatgtaaaaaaattctttgacgaaaaaggtattaaaaaacgtgatgcttat
atcaacagtcttgtaaatggttgcactggtgtaaaacgcactacagggcaacaccctggc
ggtatcatggttattcctcgtaatatggacgtacatcacttcacaccaattcaaagacct
gctgacgatactacgacaaatacgataactacacattttgattaccactctatcagtagc
cgtctagtaaaattagatatacttgggcacgatgatcctacagtaataaaaatgctcgaa
aatataactcatcgcgaccctagaactattccttttgatgacccagctactatgagtatt
ttttcgtctacagaagcacttggtgtaacgccagaagaactcggtgctacatctggcaca
tttggtattcctgaatttagaacaccatttacacgtcaaatgctcgatgacactaaacct
aaaaaattcagtgatttagtgcgtatcagtggattttctcatggtactaatgtgtggctt
gaaaatgctcaagatttaattacctcaggaacttgtactgtttccgatgcgatttcttgt
cgtgatgatatcatgatgcatttaattcacagtggtattgatccactattttcctttaaa
actatggaaaaagtgcgtaaaggtaaaggtcttagtgaagatgatattaaagtcatgaaa
gatggcggtatacctcaatggtatattgactcttgtctaaaaataaaatatctcttccca
cgtgctcatgctacagcttatgttatgatggcatatcgcatagccttttgcaaagttcac
tatccacttgccttttatgctgcttatttctccattcgtgctgctgaatttgatgcagat
attatttctaaaggtaaattagctgttcgtgataaactagacgaaattattgaacttgaa
aagcagaaaaaactatctgtaaaagataaaggcttccaagtcgttttagaacttgcttgg
gaaatgtatcttcgtggtttttctgtagaaaaagtagacctttataaatcaaatgctgat
aaattcatcttacatgaaaaatctctattaccgccatttactgcccttactggtatcagt
actatggctgcaaataatatcgttcaagctcgccttgaaggggaattcacttctattgat
gacctcaaaaagcgtgctagtttatctacaccaattgttgaacgcttgcgtgaacatggt
tgcttagatggtctacaagaaagtgaccaaatttccttattcagttaa
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