Mycoplasmoides gallisepticum NC08_2008.031-4-3P: HFMG08NCA_4940
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Entry
HFMG08NCA_4940 CDS
T02327
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta (RpoE)
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
mgan
Mycoplasmoides gallisepticum NC08_2008.031-4-3P
Pathway
mgan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HFMG08NCA_4940 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgan03021
]
HFMG08NCA_4940 (rpoE)
03400 DNA repair and recombination proteins [BR:
mgan03400
]
HFMG08NCA_4940 (rpoE)
Transcription machinery [BR:
mgan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HFMG08NCA_4940 (rpoE)
DNA repair and recombination proteins [BR:
mgan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HFMG08NCA_4940 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
P53_TAD
Motif
Other DBs
NCBI-ProteinID:
AFP81527
LinkDB
All DBs
Position
843883..844287
Genome browser
AA seq
134 aa
AA seq
DB search
MASLIDKAYEVAQKNFVKKEFTFNDLWKLVVKDENFNKKDAQELIGAFYTDLIQDTRFVY
VGDQKWLIKSMMLHDEWAKLSETLHNQQEYLEEGYEHVKVQVEVDESSPEISNEGEESSL
IDDNIIVDSTEEEN
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattaattgataaggcttacgaagttgcccaaaaaaactttgtcaagaaggaa
tttacttttaacgacttatgaaaactagttgttaaagacgaaaacttcaataaaaaagat
gctcaagaactaattggagcattctatactgatttaattcaagacactagatttgtttat
gttggtgaccaaaaatggttaattaaatcaatgatgcttcatgatgaatgagcaaaatta
tctgaaacattacataaccaacaagaataccttgaagaaggttatgaacacgtgaaggtt
caagttgaagttgatgaatcttctcctgaaattagcaatgaaggtgaagaatcttcatta
atcgacgacaatattattgttgattcaacagaggaggaaaattaa
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