Megalopta genalis: 117225271
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Entry
117225271 CDS
T07400
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mgen
Megalopta genalis
Pathway
mgen03020
RNA polymerase
mgen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117225271
09124 Replication and repair
03420 Nucleotide excision repair
117225271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117225271
03400 DNA repair and recombination proteins [BR:
mgen03400
]
117225271
Enzymes [BR:
mgen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117225271
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117225271
DNA repair and recombination proteins [BR:
mgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117225271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
117225271
NCBI-ProteinID:
XP_033334567
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGIISPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNVCEGGDEMDINKENQEQPPAERKPGHGGCGRYQ
PNLRRSGLDVTAEWKHVNEDSQEKKIALTAERAWEILKHITDEESFILGMDPKFARPDWM
VVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKANNELIRNEQAGAAAHVISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKSRLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKSSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPS
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSNKSFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNKDRGVLRE
IFRSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLEKCIIVAGDDR
LSKQANENATLLFQCLVRSTLCTKCVSEEFRLSGEAFEWLIGEIETRFQQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLIGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDKF
TGDTEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKAGIEIPMAVGAGVMGTAGMFFGSVAT
PSMSPQMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQPG
SPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTP
ASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPT
YSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSP
TSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtccgactccaaagcgcctttacgaactgtaaaaagggtccaatttggcatt
atttctcccgatgaaatacgtcggatgtccgtcacagatggcggcattcgttttccagaa
actatggaaggtggtagacccaagttgggtggacttatggacccaaggcaaggtgttatt
gatagaaactcgcggtgtcagacatgtgctggtaacatgacagaatgtcctgggcatttt
ggacacatagatttggccaaaccagtctttcacgttggttttataacgaaaacaataaaa
atattgagatgcgtttgtttctattgctccaaattacttgttagtccacacaatccaaag
atcaaagaaattgttatgaaaactaaaggtcaaccacgtaaacggcttacatttgtttat
gatctatgtaaaagtaaaaatgtctgcgagggtggtgatgaaatggatatcaacaaagaa
aatcaagagcaaccgcctgcagaaagaaaaccaggacatggaggttgtggtagataccaa
cctaatctcagaagatcaggcttggatgttactgcagagtggaaacatgtaaatgaagat
tctcaagagaagaaaattgcactcacagcagagagagcatgggaaatattaaagcacatt
acagatgaggaatcattcattctgggtatggatccaaaatttgctagaccagattggatg
gtagtaactgttttaccagttccaccgctgtctgtaagaccagcagttattatgtatggt
tcagcaaagaatcaggatgatttaacacacaaactagcggatatcataaaggcaaataac
gaattaattagaaatgagcaagccggagcagctgcgcacgttatatccgagaatataaag
atgttacaatttcatgtagcaacattagtcgacaatgatatgcctggaatgcctagagca
atgcaaaaatcaggaaaaccgcttaaggccattaaatctagactgaaaggtaaagaaggg
agaattagaggtaatttgatgggtaaacgtgttgatttctcagctcgtaccgtcatcaca
ccagatcctaacttacggatcgatcaagtcggtgtgcctcgcagtatcgcccagaattta
acattcccagaaattgtaacacctttcaatattgataagatgcaagaacttgtcaggcgt
ggaaactcccagtatccgggagcaaaatatatcgtcagagacaacggagaaagaatagat
ttgagatttcatccaaagtcatccgatctgcatttgcaatgtggctacagagtagagcgt
catattcgcgatggtgatttagtgatcttcaatcgtcagccgacactccacaaaatgagt
atgatggggcacagagtgaaagttctgccttggagtacattccgtatgaatctcagttgt
acgtcaccctataacgccgatttcgatggcgacgagatgaacttgcacgtaccacaatcg
atggagactcgtgcggaagtagaaaatattcacgtgacgcctcgacaaattatcactcca
caagctaacaaaccagtcatgggtattgtacaggatacactcacagctgtaaggaaaatg
accaaaagggatgtgtttatcgaaaaggaacaaatgatgaacattcttatgttcttgccc
agttgggatggaaaaatgccacagccctgtatattgaaaccaaaacctttatggacgggc
aaacagattttctccttgattataccaggtaacgtgaacatgatcaggactcacagcaca
catccagatgaggaagatgatggtccgtacaaatggatatcccctggtgacaccaaagtc
atggtagaacacggagaacttgtcatgggtattctctgtaaaaagactctgggtacatct
gccgggtctctgcttcacatttgtatgctggagctgggtcacgaagtttgtggacggttt
tatggaaatattcagactgtaattaacaactggttgttattggaaggtcactctattggt
attggagacactattgccgatcctcagacctatctcgagattcagaaagcgatcaagaaa
gccaaagaagatgtaatagaggtgattcagaaagctcataacatggaactggaaccgtct
cctggtaacactttgaggcagactttcgagaatcaagtaaacaggattctaaacgacgct
cgtgacaaaactggcggttctgcaaagaaatctctgactgaatacaacaatctaaaagct
atggtggtatcaggttcaaagggatccaatattaatatctctcaggttattgcttgcgtg
ggtcagcaaaacgttgaaggtaaacgaattccattcggtttccggaagagaacgttgcca
catttcatcaaggacgattatggtcccgagtccagaggattcgtcgagaactcgtaccta
gccggtttgacgccatccgaattttatttccacgctatgggaggtcgtgagggtcttatc
gatacggctgtaaagactgcagaaactggatacattcagcgtcgtctgataaaggctatg
gaatctgtgatggtgcactacgatggaacagtacggaactctgtaggacaactcattcag
ttgcgatacggtgaagacggtttatgcggtgaaactgtggaattccaaaacttgcccact
attaaattaagcaataaatcatttgaaaagaagtttaagttcgatccaaccaacgaacgt
tacctacgtcgtatctttaatgaagacatagtcagagagatgatgggatctggagaagta
atttctgaattggagagagaatgggagcagttaaacaaagatcgcggtgtgcttagagag
attttccgtagcggcgaatccaaggtggtattgccttgtaatttacagagaatgatctgg
aatgtacagaagattttccacataaacaaacgagcacccaccgacttaagtcctatgaga
gttatacaaggtgtaaaggatctcctagagaagtgtatcattgtagctggtgacgacaga
ctcagcaaacaagcaaacgaaaacgctacattgctattccaatgtttagtgagatctact
ttatgtacaaaatgtgtttctgaagaatttaggctgtctggtgaagcctttgaatggttg
attggagaaattgaaacgagattccaacaagcacaggtatcacctggtgagatggtaggt
gccttggccgctcagtcgctcggtgaaccagctactcaaatgacattgaacactttccac
ttcgctggtgtatcatcgaagaacgtaacccttggtgtacccaggctaaaggaaattatc
aatatcagtaagaagccaaaggctccttcgttgactgtgtttttgatcggcgctgccgca
agagacgcggagaaagcgaagaacgttctctgtcgtctggagcacaccaccctaaggaag
gttaccgcaaacactgcaatctactacgatccagatccgcagaacactgtgattgcggag
gatcaagaattcgtaaacgtctactacgaaatgcctgatttcgatcccactaaaatatcg
ccatggttacttcgtattgaattggatcgaaagagaatgacggataagaaattgaccatg
gaacaaatagcagaaaaaattaacgctggctttggagatgacttgaactgtatattcaat
gatgacaatgctgaaaaattggtcttgcgaattaggataatgaatagcgacgataaattc
acaggagacacggaggaggaaactgtagataaaatggaggacgacatgttcctccgatgt
atcgaagcgaacatgctcagtgatatgactttacagggtattgaggctataggaaaagtg
tacatgcatttaccacaaaccgattcgaagaaacgtatcgttatcacggaaactggagaa
tttaaagcaatcgcagaatggttgttggaaacggacggaacaagtttgatgaaagtacta
agcgaaagggatgtggacccagttaggacattcagtaacgacatttgtgaaatattccaa
gtgttgggtatagaggctgtgcgaaaatcagtagaaaaagaaatgaatgctgtattgcaa
ttttatggtctttacgtgaattatcgtcatcttgctttactttgcgacgttatgacggct
aaaggacacttgatggctattacccgtcacggaattaataggcaagacactggcgctctt
atgagatgttctttcgaggaaacggtagacgttttactagatgcagcatctcacgcagaa
gttgatcccatgagaggagtatcagaaaacattataatgggacaacttccacgtatagga
acaggatgtttcgatttgctattagatgcagaaaaatgcaaagcaggtattgaaataccg
atggctgtaggagctggtgtaatgggaactgctggaatgttctttggcagtgttgctaca
ccgagcatgagcccacaaatgacaccttggatgggtgctactccaggctatggagcatcc
agcatgtcacctgcattgggaagtggtatgacacccggaggtgcatgcttctcgccatcg
ggagcatcagacgcatcaggactttcgccagcctattctgcatactcaccacaacctggt
agtccaggaagtccaggacccagcatgagtccatatccgatgtcacctgcaggaggtgca
tcacctagttactctcctacatctcccgcctatttaccaacatcaccgagcatgacaccg
tcgagtcccaattactcgccaacgagtcctacttactcgcccacgagtccaaactactcg
ccaacgagtccaagttactctccgacatcgcctagttattcgcctacgtcgccaagctat
tcaccaacgagtccaagctattcaccaacatcgccgagctactcaccgacatcaccgagt
tattcaccgacgagtcctagttactcaccgacaagtcccagttattcaccgacgagtcca
agttactctccgacatcgcctagttattcgccaacgagtccaagctattcaccaacaagt
ccaagctattcaccaacatcgccgagctactcaccaacatcaccgagttattcaccgacg
agtccaagctattcgccgacaagcccaagctattctcctagttcaccaaattacacgcct
gcgtcgccatcttattctcctacaagtccaagctattcaccaagttctccacaatattcg
cctgctagtccaagctattcaccgagcagtcccaaatattcgccaaccagtccgagttac
tcgcccacatcgccgtcattcgctggaacttcaccgcaatatacacctgcgagtccaacg
tattcgccaacaagtccaacatattcaccaacgagtccatcgtactcgccgagctctcca
caacacacagcatcaggaagtacacgatattcgcccagcagtccgaactattctccaacc
agtccaacctactcgccgacaagtcctcaatactcgccatcgagtactaagtattcgcct
accagtccgacatacacaccaaccagtccaagttactcaccaacgagtccaacgtactcc
ccaccagtgccgggctactcaccaacgagtccaacctattccccggcgtcaccagcttac
gaaacagatgactag
DBGET
integrated database retrieval system
