Pyricularia oryzae: MGG_08804
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Entry
MGG_08804 CDS
T01027
Name
(RefSeq) Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MGG_08804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_08804
Enzymes [BR:
mgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
MGG_08804
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
MGG_08804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
AAA_16
nSTAND3
ATP_bind_1
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
2678970
NCBI-ProteinID:
XP_003719167
UniProt:
A4QQE0
LinkDB
All DBs
Position
6:66797..69396
Genome browser
AA seq
455 aa
AA seq
DB search
MSIPGLGLIPEKPATSASRTYTLEPRQEYRFSVSHGASITITLTRGTAERDGTELALNVA
YTLSGVKSKILSWHGANLSIEGITDHESVAGPDDAANTAHLNLHAFLQRSREAAARNNGG
GRSAPHGPRVLVAGKTGCGRTSLVRTLAAWATRTGAQPMVVDADPGEGLLTLPGTLSAAV
FGTVMDVASEGGWGAAPSSGPSAVPVKLPLVFYYGRRRVEEDRDLYKGVVNSISSAISAR
AADDPAVRSAGMLIDTPPYVEGKGADVLIHIAEELNVNIIVTIDTPSLHTELTQRFSGVK
NVLGEHVSVVALDKSSGVMERDEGFLQHMGEASIKEYFFGDAKITLSPFTQQVAFDELAI
YTSPEASDYSAEPGALERIPQPLPEMAHWVLAMMDAAPNDPPHKIRYAPVSGFVYVAAVD
KERRRMKILAPVSGRLGDKPLVWGKWPEPHINLLG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccgggtttggggctcatccccgagaagcctgcaacctcagcctcccgaaca
tacacccttgaaccgcgtcaggaataccgcttctccgtctcgcacggcgcgtccatcacc
atcaccctcaccaggggcacggccgagcgcgacggcaccgagcttgccctcaatgtcgcc
tacaccctgtcgggcgtaaagtcgaaaatcctctcctggcacggcgccaacctctcaatt
gagggcatcacagaccacgaatccgtcgcgggccccgacgacgccgcgaacaccgcacac
ctgaacctgcacgcgttcctccaacggtcccgcgaggccgcggccaggaacaacggcggc
ggccgctccgcaccccacgggccgcgcgttctcgtggccggcaagacgggctgcggccgc
acgagcctggtgcggacgctggcggcgtgggcgacgcggacaggcgcgcagcccatggtg
gtagatgcggatccgggggaggggttgttgacgctgcctggcacgctgtcggcggctgtt
ttcgggacagtcatggacgtagcgagcgagggtgggtggggtgcagcgccgagcagcggg
ccgagcgccgtgccggtcaagctgccgctcgtgttctactatgggcggcggcgggtggag
gaggatagggatctctacaagggggtcgtcaattctatctcgtcggccatctcggccagg
gcggcggatgatccggctgtcaggagtgccgggatgctgatcgatacaccgccttatgtg
gagggcaaaggggctgatgtgttgattcacattgcagaggaattgaatgtaaacataatc
gtgacgattgatacgcccagcttacacacggagcttacgcaaagattttctggcgtcaaa
aacgttctcggggagcacgtatccgtggtggcgctggacaagtctagtggcgtcatggag
agggacgaaggtttcttgcagcacatgggagaagcgagcatcaaggagtattttttcgga
gatgccaaaatcactctcagccctttcactcagcaggtcgcctttgatgagctggccatc
tacacgtcacccgaagcttctgactattcagctgagcctggggcattggagcgaatcccg
cagccgctgcctgaaatggctcactgggttctggcaatgatggacgcggcacccaacgac
ccgccgcacaagattcggtatgcgcccgtgtcgggattcgtgtacgtcgccgccgtggac
aaggaaaggcggcggatgaagatcctggcccccgtcagcgggagactcggagacaagccg
ctggtctgggggaaatggcccgagcctcacatcaaccttctcggctga
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