Magnetospirillum gryphiswaldense MSR-1: MSR1_01700
Help
Entry
MSR1_01700 CDS
T05662
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MSR1_01700 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mgry01007
]
MSR1_01700 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgry03016
]
MSR1_01700 (lysS)
Enzymes [BR:
mgry01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MSR1_01700 (lysS)
Amino acid related enzymes [BR:
mgry01007
]
Aminoacyl-tRNA synthetase
Class I (A)
MSR1_01700 (lysS)
Transfer RNA biogenesis [BR:
mgry03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MSR1_01700 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1
tRNA-synt_1g
Crust_neurohorm
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AVM72691
LinkDB
All DBs
Position
complement(164004..165590)
Genome browser
AA seq
528 aa
AA seq
DB search
MSDLAALARTSSAWPFQEAKTLLDERLGGKCPDKGYVLFETGYGPSGLPHIGTFGEVVRT
TMVRNAFKILAPETPTRLFAFSDDMDGLRKVPDNIPNKDIVAPHLGKPLTRIPDPFGTHA
SFGHHNNARLRAFLDSFGFEYEFQSATEWYETGKFDAAKLRILECYDQVINVILPTLGEE
RRQTYSPFLPVCPETGVVLQVPVVERNVAAGTIVYRREDGRLVETPVTGAHCKMQWKADW
AMRWYALGVDYEMSGKDLIPSVELSGRICRNIGGTPPLNLTYELFLDDQGQKISKSKGNG
LAVEDWLKYAPPESLALFMYQKPKAAKRLYFDVIPRSVDDYLTFLGKFDTDETQKRLDSP
VWHIHNGQPPREDSHLTFSILLNLASVCNSEDKAVLWGFIQRYAPGASPETAPILDKLVD
GAVAYYRDFVKPAKQYRTATIDEAQAFADLEAALRALPADASAEEIQSAVYDIGKRDCFG
ELKAWFKACYEVLLGQDQGPRMGSFIKLYGIDNTITLLGKAAKGESLA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcttgccgctctcgcccgcacctcctcggcctggcccttccaagaggccaag
accctgctggacgagcgactgggcggcaaatgtccggacaagggctatgtgctgttcgag
accggctacggcccgtccggcctgccccatatcggcaccttcggcgaggtggtgcgcacc
accatggtcaggaacgccttcaagattctggcccccgaaacccccacccgtctgttcgct
ttttccgacgacatggacggattgcgcaaggtgcccgacaacatccccaacaaggacatc
gtcgccccccatctgggtaagccgttgacccgcattcccgacccgttcggcacccatgca
agctttggccatcacaacaacgcccggctgcgggcgttcctggacagcttcggctttgaa
tacgagttccagtcggcgaccgaatggtacgagaccggcaagttcgacgccgccaagctg
cgcatcctggaatgctatgatcaggtgatcaacgtcatcctgccgacgctcggcgaggaa
cggcgccagacctattcccccttcctgccggtctgcccggagacgggcgtggtgttgcag
gtgccggtggtggaacgcaacgtcgccgccggcaccatcgtctatcgccgcgaagacggc
aggctggtggaaaccccggtgaccggcgcccattgcaagatgcagtggaaggccgattgg
gccatgcgctggtatgcgctcggcgtcgattatgaaatgagcggcaaggatctgatcccg
tcggtggaattgtcgggccgcatctgccgcaatatcggcggcacgccgcccttgaacctg
acctacgaattgttcctggacgaccagggccagaagatcagcaagtccaagggcaacggt
ctggcggtggaagactggctgaaatacgcgccgcccgaatcgctggcgctgttcatgtat
caaaagcccaaggcggccaagcggctgtatttcgacgtcatcccgcgttcggtcgatgat
tatctgacctttttgggcaagttcgacaccgacgagacgcaaaagcgcctggatagcccg
gtgtggcacatccacaacggccagcccccgcgcgaggattcgcacctgaccttcagcatc
ctgctgaatttggccagcgtctgtaattcggaagacaaggccgtgctgtggggcttcatc
cagcgctacgcccccggcgccagccccgagaccgcccccatcctcgacaagctggtcgat
ggcgccgtcgcctattaccgcgacttcgtcaagccggcgaagcagtatcgcaccgccacc
atcgacgaggcccaggccttcgccgacctggaagcggccttgcgtgccctgcccgccgat
gccagcgccgaggagatccagtcggcggtctacgatatcggcaagcgcgattgcttcggc
gagttgaaggcgtggttcaaggcctgttacgaggtgctgctgggccaagaccaggggccg
cgcatgggcagcttcatcaagctttacggcatcgacaacaccatcaccttgctgggcaag
gcggccaagggcgaaagcctggcctga
DBGET
integrated database retrieval system
