Mannheimia haemolytica USMARC_2286: N220_13230
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Entry
N220_13230 CDS
T02758
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mhal
Mannheimia haemolytica USMARC_2286
Pathway
mhal00540
Lipopolysaccharide biosynthesis
mhal01100
Metabolic pathways
mhal01250
Biosynthesis of nucleotide sugars
Module
mhal_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mhal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
N220_13230 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mhal01005
]
N220_13230 (rfaD)
Enzymes [BR:
mhal01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
N220_13230 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mhal01005
]
Core region
N220_13230 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
ThiF
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGR76208
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All DBs
Position
2511006..2511932
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AA seq
308 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKNGEKFINLVDLDIADYCDKEDFIASI
IAGDDFGEIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLHFCLDRQIPFFYASSAATY
GGRSDNFIEKREFEGPLNAYGYSKFLFDEYVRRILPEAESPVCGFKYFNVYGPREQHKGS
MASVAFHLNNQMLKGENPKLFAGSEQFLRDFVYVEDVAKVNLWAWQNSISGIFNLGTGKA
ESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFTQADLTNLRAAGYTGTFKTVAEGTA
EYMAWLNR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcaccggcggcgcaggtatgattggcagtaacattgttaaagccttaaat
gaaatcggtcgcaaagatattttagtagtagataacctcaaaaacggggaaaaatttatc
aacttagtggacttagatattgcggattattgcgataaagaggatttcatcgcctctatt
atcgccggcgatgattttggtgagattgatgcggttttccatcaaggggcttgctcggca
accaccgaatgggacggcaaatacttaatgcaaaataactacgaatattcaaaagagtta
ttgcatttttgcttagatcgccaaattcctttcttctatgcctcaagtgcggcaacctat
ggcggacgttcggataattttatcgagaaacgggagtttgaaggtccattaaatgcttat
ggctactccaaattcctgtttgatgaatatgtccgccgtattttgcctgaggcagaatca
ccggtctgtggtttcaaatatttcaacgtatacgggcctcgtgagcaacacaaaggttca
atggcaagcgtggcattccacttaaacaaccagatgttaaaaggggaaaatccaaaacta
tttgccggctcagagcagttcttgcgtgattttgtttatgtggaagatgtggcaaaagtg
aatctttgggcgtggcaaaacagcatttctggcattttcaacctcggcaccggaaaagcg
gaatctttccaagaagttgcgaatgcggttatcaaataccacggcaaaggcgaaattgaa
accatcccattcccggatcatttaaaatcccgctaccaaacgttcactcaagcggactta
accaacctaagagccgctggctacacaggcacatttaaaaccgttgctgaaggaacagcg
gaatatatggcgtggttgaatcgctaa
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