Candidatus Mycoplasma haematolamae: MHLP_03425
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Entry
MHLP_03425 CDS
T02329
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K13797
DNA-directed RNA polymerase subunit beta-beta' [EC:
2.7.7.6
]
Organism
mhl
Candidatus Mycoplasma haematolamae
Pathway
mhl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MHLP_03425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhl03021
]
MHLP_03425
03400 DNA repair and recombination proteins [BR:
mhl03400
]
MHLP_03425
Enzymes [BR:
mhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MHLP_03425
Transcription machinery [BR:
mhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MHLP_03425
DNA repair and recombination proteins [BR:
mhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MHLP_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AFO52265
UniProt:
I7BAE1
LinkDB
All DBs
Position
complement(544741..552702)
Genome browser
AA seq
2653 aa
AA seq
DB search
MNYKFKDVNSLVRRIDFSKFSTGDIIPPNLRGIQIDSYHKFLAKGLEELIYRYFPMSSTS
GNTQIFLEEIITKEPDISEEEAINSSMSYQCSLYLKLRLVSKFHEEKSKNSTSKIFFGNM
PVFSSSANFIINGTEKFVISQIVRSPGLYVLNKAQIRLSNSRKRIQEGIVCELLPVKGVL
LLFCLPTEKEVDSYIKLVARNASGSNAFQFPVTVFMKAMGMTHETIVELFKDDPEVIRSL
SQENLNVADIKKDAKFDSIMSEITSSKNIQKIKDLSKGWIKETLYSLCLTYSDIEQTADK
KTKQELLQKIYIELAASQIITSLSISTETARRGVTSYQELLWSYLFDKYYYSILPAGRYK
INHKLSVWERMRNRYLAEDVKDMSGKVVFPKNTFMDFDTLSKFKEMDMKGELDIRHSFKT
ATSFEDLGNRYKDFYESTYEKVSVHVGGLDSEVVTLLGTPYLHDESPIVASDIVSIMSYI
IQLKHRVGEYDDIDNLGNKRLKLIDELLEGRIILALTRMQKFSVDRMNSLESKLNYFSLK
DEMDDYFSIGSIINTKPFQIVIKEFFNSHQLVQFLDQQNILSELTNKRKISAMGPGGIKR
EDPNLNIRDVHYSYYGRICPIETPEGMNIGLIMALASLSKVDQYGFINTPYFRVKNGQIT
NDVVWLNSIQERSFYIAAATSERDDSGKLLGPVTVRRDEEVESVDPEVVHFIDVDCSQMT
SISASLIPFLEHDDANRVLMGANMQRQAVPLLSPKSPIVATGTESKIAKDSGIVVYAEDD
GHITYLDSSCIKVKYSNAQLGEKTYYLQKFGKSNQNTCKNQLIIPRDTYEVKKGELLIDG
HAIQAGELALGQNVLVAFTTWSGYNYEDAIVLSSRLVQENVYTSLHIQEFTIDCMRTKIG
DEEITRFIPGCTSEEKKYLDESGIVLVGAAVKEGDILVGKTSPKATGEVSAEERLLQAIF
AEKAKSVKDSSLRLPAGAEGVVTKILRYSVANGDRLGDDILETVKIFVTSKRNIQIGDKM
VGRHGNKGIVSKVVPVEDMPYLEDGTAIDILLNPLGVPSRMNIGQILETYLAYSSRKLVF
KKVLTHYFSKDLLSLTALFSKPKSELIALERVLDSYMKEKGINTLQEASEQLTQLDFSII
LSKSGFKYDELEIKVLTPIFAGCKHSDLINIMSDAGVDYKAHNGRFTLFDGRTGEKFKDP
ISVGIIYMLKLDHMVDDKIYARSVGPYSKITQQPLGGKCQNGGQRFGEMEVWAMEAYGAA
YNLRELLTLKSDDIQARNLIYYSVIKGQMLPTPGISESFKLLVKKLQALGLKVNLQYGPF
KRIVGFDEYLAKRAKLNEQIQFLTWSNQAMRNDQEGPRNWDSMQEIEEEDLTINGLQISI
TSPEFLLSLSRGEVKSAETINYKTFKPEKGGLFCEAIFGPVKDYECFCGKYKRVRYRGKY
CEKCGVCITESLVRREWMGHIALACPIAHIWMIKELPLPSKISLVLGIKYKNVEEVVYFV
NYIVVEVTDIGFDHKNIFEPLEIINVSDQDSPMKSLFKLRRLLRLICEEIERKDPEGRES
LAYQQGRAYYKALSSSNLPFSLYDVFEYIYQYSGIKIGTGAEAIYELLKKVDLDSLEYSL
QKKLTKDKEGINYSDVATKRLLSRLEVIKWFKQSGNKPEWMILKNLLVLPPNLRPIVQIE
AGRFTTSDLNIFYRRIIIRNERLKRILSLNVTSIIANNEKRMLQEAVDSLIDNASRKKPL
VAKDKHLLKSLTDHLKGKQGLFRQNLLGKRVDYSGRSVVVVGPELRLHQVGLPILIVLKL
FKPFIIRELIRSYIDEKTGERTQIAQNIKLAEKIIDDQEDILWPVVHRIIKERPVLLNRA
PTLHSLGIQAFEPVIVEGKAICLHPLVTTAFNADFDGDQMAVHLPLSEEAVKEARAILLS
PWHVLAPKNGQAILMPSQDMVLGLFYLTNTKKGAKGEGRLCSSTEEVKYLYTTGEVDLNA
RIAIHTSQFPEKSWEKEGLLITTPGKVIFNLALPADYRYVNDSSKKFISLEDILPPEENY
KEYIANMEEKAPFSKSVVQTIIEEVYERYSIIVTANMLDNIKSLGFEFSTKSCITISPFD
IPRFKDSFKEDLIKEAEAKVKDQKAYFELGMITEDERYQKVISLWSEVKDKVSDKVKEWF
RGTEYKENPMAIMERSGARGSLSNFVQLSGMRGLMNRSYNYAQNTDSKVIKDIIEVPIKN
SFIEGLNMIEYFNSSYGSRKAMADTAVKTAKSGYMTRKLVDTSQEVIVKSLDCKTNKGLL
VQAIKAEKSEKEVKTFEERIRYRCAFKDVVNPADGSVIVPEGEYITSEAAEKIVEAGITA
IEVRSSFYCLQKQGICQKCFGYHLTTKKPIEVGTAIGIIAAQSVGEPATQLTMRTFHSGG
VAGEQNIAQGFERLKQLFDIITPNKWEKAVLTEISGTIKSISRQGENKIVEVKGEACTRV
YEVDLSIPLLVKEGDTVRFGDRLSDGLIDLKKLLEIAGLDRVREYMVEKILEVYWLQGID
LSDKYIELIVTQLTSKWKIIASNDSSMNVGEIVDISDLHKEVTRLLLDRKNPPVAIPMLF
GLEEVPAKSDSFLAAASFQDTKKILIDASVKAQLDNLVSLKENIIVGNLIPAGTGLLNDY
VVREQLREGIPVT
NT seq
7962 nt
NT seq
+upstream
nt +downstream
nt
ttgaattacaagtttaaggatgttaattcccttgtaagaaggatagatttttctaagttc
tcaacgggggatatcattcctccgaacttgagggggatccaaatagattcctatcacaag
tttcttgctaaaggccttgaagaacttatatatagatactttcctatgtcttctacatca
gggaatacacaaatattccttgaagagattatcacaaaagaacctgatatctctgaagaa
gaagccatcaacagctctatgagctatcaatgctccctatatctgaagcttcgtcttgtt
tctaagttccatgaggaaaagtcaaaaaattctacctcaaagatctttttcggaaacatg
cctgtcttttcttcttcagctaacttcatcatcaacggtactgaaaaatttgtaattagc
caaatagttagatctcctggtctttatgttctaaataaggcccaaataagattatcaaac
tccagaaagagaatccaagaagggattgtctgtgaacttcttcctgtaaagggagttctt
cttctattctgtctacctactgagaaagaagttgactcttatatcaagctagttgccaga
aatgcatcaggcagcaatgccttccaatttcctgtgactgtatttatgaaggctatggga
atgacccacgaaactattgttgaactgtttaaagatgatcctgaggttattagatccttg
tctcaagaaaacttgaatgttgctgatatcaagaaagacgcaaagtttgactctattatg
agtgaaatcaccagctctaagaacattcaaaagataaaggatctatctaaaggatggatt
aaggaaacactttactctctgtgtctgacctattcagacatagaacaaacagcagataag
aaaaccaaacaggaattacttcaaaagatctatatagagttagcagcttctcaaatcatc
acctctctatctattagtacagagacagcaagaaggggagttacatcgtatcaagagcta
ctctggtcctatttgtttgacaagtactactacagcattcttcctgctggtagatacaag
attaatcacaagctttctgtatgagagagaatgagaaacaggtatctagcagaagatgtg
aaggacatgtctggaaaggttgtcttcccaaaaaacacctttatggactttgatactctg
tccaaattcaaggaaatggatatgaaaggcgaacttgacataaggcattcatttaagact
gcaactagctttgaagacttaggtaacagatacaaggatttttatgaatctacctatgaa
aaagtttctgtacatgtaggtggtcttgacagcgaagtagttaccctattaggaactcct
tatctacatgatgaaagtcctattgttgcctcagatattgtgtccattatgtcttacatc
atccaattgaagcacagagttggtgagtacgatgacattgacaacctaggtaataagaga
ctaaagctaatagacgaacttctagagggaagaatcatcctagccttaacaagaatgcaa
aagttctctgtagacagaatgaacagccttgaatctaagctgaattacttctccctaaag
gatgagatggatgactacttctccataggttcgattatcaacacaaagcctttccaaata
gttatcaaggaattctttaactctcaccaattagttcaattcctagaccaacaaaatatc
ctttctgaacttacaaacaagagaaagatctctgcgatgggcccaggaggtatcaagaga
gaagaccctaacctaaatattcgtgacgtccactattcctactacggacgtatctgtcct
attgagactcctgaaggcatgaatatcggtcttattatggccttagcttccctatctaag
gtagaccaatatggtttcataaatactccttactttagggttaagaatggtcaaatcacc
aacgacgttgtgtgattgaactctattcaggaacgaagcttctacatagctgctgcaact
tctgaaagggacgactcaggaaagctattgggtcctgtaactgtcagaagagatgaagaa
gttgaatcagtagatcctgaagttgtccactttatcgatgttgactgttctcaaatgacc
tctatctctgcttctttgatcccctttttggaacatgatgacgctaacagggtattgatg
ggcgcaaacatgcaacgacaagctgtgcctctgctgtctcctaagtcacctatcgtcgct
actgggactgaaagcaaaatagctaaggactcagggatagttgtttatgcagaagatgat
ggacatataacctatctagatagcagctgcatcaaggttaagtattcaaatgctcaacta
ggagaaaagacctattaccttcaaaagtttggtaagtcaaaccaaaatacctgcaagaat
caactaatcatccctagggatacctatgaagtcaagaagggagagttactgatagatggt
catgctatccaagcaggtgaattagctttaggtcaaaatgtattagttgccttcactacc
tgaagcggttacaactatgaggacgctattgttctttcttcaagactcgtccaagaaaac
gtatatacctctcttcacattcaagaattcaccattgattgcatgagaaccaagataggt
gatgaagagataactagattcattcctggttgtacttctgaggaaaagaagtacctagac
gaatcagggattgttttggtaggtgccgctgttaaagaaggtgacattcttgtaggtaaa
acatcaccaaaagctacaggtgaagtaagcgctgaagaaagactactacaagctatcttt
gctgaaaaggctaagagcgttaaggactcctccctaagacttcctgcaggagctgaaggg
gttgttacaaagatccttaggtactctgttgctaacggagatagactaggagacgacatt
cttgaaacagtaaagatcttcgttacctcgaagagaaatatccaaattggtgacaagatg
gttggtagacacggtaacaagggtatcgtatctaaggtagttcctgtagaggatatgcct
tatctagaagacggtactgctatagatattctcttgaatcccctaggtgttccttcaaga
atgaacataggtcagattcttgaaacctatctggcttactcatctagaaagttagtcttc
aagaaggtattgactcattacttctctaaggatctgctgagtttgacggctttgttctct
aaacccaagtcagagttgattgctttggaaagggtgctcgatagttacatgaaggaaaaa
gggataaatactctacaagaagcttcagaacaactaactcaactggatttctccatcatc
ttgtctaagtcagggtttaagtacgacgaactagagatcaaggtactgactcctatcttt
gctggttgcaagcatagtgacttgataaatatcatgtctgatgctggagtagattacaaa
gctcacaatggtagatttaccctatttgacggaagaactggagaaaagttcaaggatcct
atctctgtcggaatcatctacatgcttaagttggaccacatggtcgatgacaagatctat
gcaagatctgtaggtccttactctaagatcacccaacaaccgttaggcggtaagtgtcaa
aatggtggtcaaagatttggggagatggaagtatgagctatggaagcttacggtgctgcc
tataaccttcgtgaacttctaacgcttaagtcagacgatattcaagctagaaacttaatc
tactactcagtaattaagggccagatgctccctactcccggaatctccgagtctttcaag
cttcttgtcaagaagcttcaagctctgggcctaaaggtcaacctccaatatgggcctttc
aagaggattgttggttttgatgagtacctagctaagagggccaagctcaatgaacaaatt
caattcttaacttggtctaatcaagctatgagaaatgatcaagaaggtcctagaaactga
gactctatgcaagaaatagaggaagaagacctaacaattaacggactacaaatctctatt
acctctcctgagttccttctttctctgtctagaggtgaagttaagtcagctgaaactatc
aactacaagacctttaagcctgaaaagggaggtctcttctgtgaagctatctttggtcct
gtaaaagactatgaatgcttctgcggtaagtacaagagggttagatacagaggtaagtac
tgtgaaaagtgtggcgtttgcattactgaatcgctggtaagaagagagtgaatgggccac
attgccttggcttgtcctattgctcacatttggatgatcaaggaattgccccttccttca
aagatctctttggttctaggtatcaagtacaagaatgtagaagaagttgtctactttgtt
aactacatagttgttgaagtcacagacataggctttgaccacaagaacatctttgaacct
ctagaaatcatcaatgtatctgatcaagacagtcctatgaagtcgttgttcaagcttaga
aggcttcttcgtctaatttgtgaagaaatagaacgaaaagatcctgagggaagagagtct
ctagcatatcaacaaggtagggcttactacaaggccctgtcatcttctaaccttcccttt
tctctttacgatgttttcgaatacatctatcaatacagcggtatcaagataggtactggt
gcagaagctatctatgagcttctgaagaaggtagacctagactctctggaatactcactt
caaaagaagctaactaaagacaaggaaggaattaactactcagatgtagctacaaagaga
ctcctttcaagactagaagttattaaatgattcaagcaatcaggaaacaaacctgagtga
atgatcctaaagaatctattagttcttcctcctaacttaagacctattgttcagatagaa
gcaggtagatttacaactagcgacctcaacatcttctacagaaggatcatcatcagaaat
gaaagactgaagagaatattgagcctaaatgtaacttcaatcatcgctaacaatgaaaag
agaatgcttcaagaagctgttgactctttgattgacaatgcttcaagaaaaaaacctctt
gtcgccaaggacaaacaccttcttaagtctctaactgatcaccttaagggtaagcaaggt
ctctttagacaaaaccttctaggtaagagagttgactactctggtagatctgttgtagtt
gtaggtcctgaacttagacttcatcaagttggtcttcctatcttgattgttctgaagctg
tttaagcctttcattattcgtgaattgatcagaagctacatagacgaaaagacaggagag
agaactcagatagctcaaaacatcaaactagctgagaagattattgatgatcaggaagac
atactgtgacctgttgtgcacagaatcatcaaggaaagacctgtactgttgaacagagct
cctactttgcacagcctagggattcaggcttttgaacctgtgattgtagaaggtaaagct
atttgcctacaccctcttgtaactacagctttcaatgctgactttgacggtgaccagatg
gcagtccacttgccattgtctgaagaagcagttaaggaggcaagagctatcctattgtca
ccttgacatgttttagctcctaagaatggtcaagctatcttgatgccttctcaagacatg
gtccttggtctcttctacctaaccaacaccaagaaaggagctaaaggtgaaggaagacta
tgttcctctacagaagaagttaagtacctatacactacaggtgaagtagatctaaacgca
aggatagctattcatacctctcaattccctgaaaagagttgggaaaaagaaggtcttttg
ataactactccagggaaggtaatcttcaacttagcactcccagctgactacagatacgta
aacgactcttctaagaagttcatttccctagaagacattcttcctccagaggaaaactac
aaggagtacatagccaatatggaggaaaaggctccattcagtaaatcagttgttcagaca
atcattgaagaagtctatgaacgttactccatcatcgtgactgcaaatatgcttgacaac
attaagtctctaggatttgagttctctacaaaatcatgtatcactatctctccttttgac
attcctagattcaaggattctttcaaggaggatctaattaaggaagctgaagctaaggta
aaggatcaaaaagcctacttcgaattagggatgatcactgaagacgagagatatcaaaaa
gtcatctccctgtgaagtgaagttaaagacaaggtttctgacaaggttaaggaatgattc
agagggactgaatacaaggaaaatccaatggcaatcatggaacgatcaggtgctagaggt
agcttgtctaacttcgtacagctttcaggtatgagaggtttgatgaacagatcctataac
tatgcccaaaacactgactctaaggtaattaaggacatcattgaggtacctattaagaat
tcctttatagaaggtctaaacatgattgaatacttcaactcctcctatggttctagaaag
gcaatggctgacactgcagttaaaacagctaagtctggttacatgactagaaaactagta
gacacctcgcaagaggtaatcgttaagtctttggactgcaaaaccaataagggattatta
gtacaagctattaaagctgagaagtctgaaaaggaagttaaaaccttcgaagaacgaatc
agatacagatgtgcatttaaagatgtagttaatcctgcagatggttctgtaattgttcct
gaaggagagtacattacttctgaagcagctgaaaagattgtggaagcaggaataacagct
atagaagttagaagttccttctactgtctacaaaaacaaggtatctgtcaaaagtgtttt
ggttatcacctaacaactaagaagcctattgaggtcggtactgctataggtatcattgct
gcacagtctgtaggggaaccggctacccaattgaccatgaggacgttccactctggtggg
gtcgcaggtgaacaaaacattgctcaaggttttgagagattgaagcagctctttgacatc
attacacctaacaagtgagaaaaggcagtcttgactgaaataagcggaactatcaagagc
atctcaagacaaggcgaaaacaagatagtagaggttaagggagaagcatgtaccagagtc
tatgaggtagatttgagcatccctctacttgttaaggaaggagatacagttagatttggg
gacagactctctgacggactgatcgaccttaaaaagcttctagaaatagcaggtctagac
agagttagagagtatatggttgagaagatcctagaggtctactgactacaaggtattgat
ctttctgacaagtacatagagttgatagtcactcaattgacatctaagtgaaagataatt
gcatctaacgactctagcatgaatgtaggtgagatagtagacatctccgatcttcacaag
gaggttacaagattgctactagacagaaagaatccacctgtagctatccctatgttgttt
ggtcttgaggaagtgcctgcaaagtctgactctttccttgcagctgcatctttccaagat
accaagaagatcttgattgacgcttctgttaaggctcaactagataatttggtctccttg
aaggaaaacatcatcgtaggtaatttgattcctgcaggaactggcctcttaaatgactat
gtagtgagagaacaactaagagaaggaatcccagtcacctag
DBGET
integrated database retrieval system
