Methanomethylovorans hollandica: Metho_1920
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Entry
Metho_1920 CDS
T02418
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metho_1920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhz03021
]
Metho_1920
Enzymes [BR:
mhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metho_1920
Transcription machinery [BR:
mhz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metho_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AGB50096
UniProt:
L0KYA6
LinkDB
All DBs
Position
1914070..1916712
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AA seq
880 aa
AA seq
DB search
MDTLPSIPKRISAIQFGLISPREVRKMSVTNIITADTYDDDGYPIDMGLMDLRLGVIDPG
LKCKTCSSRAGECPGHFGHIELVAPVVHVGFNKTIRKALRSICRNCSALLLEPSQKKNFL
TQIDKLHEMGHLPDPVINDVFKEARKTKVCPHCGTEQLEIKFEKPTEYIEDGHKLTPTEI
RDRFENISDDDVKVIGMDPSCARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLV
DIIRINQRFQENRDAGAPQLIIEDLWELLQYHVTTFFDNEVSGVPPARHRSGRPLKTLTQ
RLKGKEGRFRGSLSGKRVNFSARTVVSPDPNLSINEVGVPEAIAIQMTIPERVIERNIEL
LRMYILKGSDVHPGANYVIRPDERRIKITENNKEELAEKVEKGWVVERQLMDGDTVLFNR
QPSLHKMSIMAHQVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHVLQTEESRAEASILMQ
VQENILSPRFGGPIIGGIHDHISGMFLLTRNENRITKNEALELLRKAEIRELPEPAGYKE
TGEPYWNGKQIFSQILPKGLNAEFPAEVCFKCDVCKKEACEYNAYVVIRNGEMIQGTIDE
RAIGAFKGIILDKVVKTYGTTAGAKFIDDFTRLAIRGVMKTGLSFGISDEDIPETAKKNI
KEVLTKAESEVQDLIAAYEAKELEPLPGRTLDETIEMKIMQTLGKARDQTGNIAGNELGL
ENSAVIMAKSGARGSMLNLTQMAACVGQQAVRGERIRRGYAGRTLPHFDKGDLGADAHGF
VKASYKSGLSPTEYFFHSIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDATVRET
RGVIVQFKYGEDGIDSTKSDYSKPENVHKIVEAVTGKKVN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggatacactaccctccatacctaaaaggatatctgcaatacaatttggcctgatatct
ccaagagaggtaaggaaaatgagcgttaccaacatcattactgcagatacctatgatgat
gatggttaccctatagatatgggactaatggaccttagactgggagttatagatcccgga
cttaaatgcaagacctgttcaagtagggcaggagaatgccctgggcattttggacatata
gagctggttgccccagtagtacatgtgggatttaacaagacaatccgcaaagcattacgc
tctatatgccgcaattgcagtgcccttttgctggaaccgtctcagaaaaagaatttcctt
actcagatcgataaactccatgaaatgggacatctgccggaccctgtgattaatgacgtt
tttaaggaggcaaggaagacaaaagtctgtccacattgtgggactgagcagttagagatc
aagttcgaaaaacccactgaatacatagaggatgggcacaagctaacacctacagagata
agggacaggttcgagaacatatcagatgatgatgtgaaagtgatcggaatggacccttca
tgtgccaggccggagtggatgatccttacagtattacccgtgccgcctgtaacagtcaga
ccatccatcacacttgagtccggccagcgcagtgaagatgacctgacccacaaacttgtg
gatataatacgtataaaccagcgtttccaggagaacagggatgcaggagcgccacaactt
atcatagaagatctgtgggaactgttgcagtaccatgtgaccactttctttgacaacgaa
gtatcaggcgttccaccggcaagacacagatccggaagacctctgaagacacttacccag
cgtctcaaaggaaaggaaggacgtttcaggggaagcctgtcaggtaaacgtgtaaacttc
tctgcacgtaccgtagtgtcacctgacccaaaccttagcatcaacgaagttggagtaccc
gaagccatagctattcagatgaccattcctgaaagagtcatcgagagaaatatagagctt
ctaagaatgtatatccttaagggaagcgatgtccaccccggggcaaactatgtgatccgc
ccggatgagagacgtataaagataacggagaacaacaaggaagagctggccgagaaagta
gagaaaggatgggttgttgagagacaactgatggatggagataccgtactattcaacagg
cagccatctctgcataagatgagtattatggcccatcaggtgaaagtccttcctaacaaa
acattcaggcttaatcctgcagtgtgccccccatacaacgctgactttgatggggatgag
atgaacatgcacgtgctacaaactgaggaatcaagagctgaagcaagtatactcatgcag
gtgcaggaaaatatcctttcaccacgtttcggcggacctatcattgggggcatccacgat
catatatcgggtatgttcctgcttacaaggaacgagaaccggataaccaagaacgaagct
ttggagcttcttagaaaggcagagataagagaattaccagagcctgcgggatataaggag
accggagaaccctattggaatgggaagcaaatattcagccagatacttccgaaaggactt
aatgcagaattccctgctgaagtgtgttttaaatgtgatgtttgtaagaaggaagcctgt
gaatacaatgcatatgttgtgatccgcaatggagagatgatacaaggcacaatcgatgaa
agggcgataggggctttcaaaggtatcatacttgacaaggtagtaaagacatacggtact
acagctggtgctaaatttatagatgattttaccaggcttgccataagaggcgtaatgaag
actggcctgagctttggtatcagtgatgaggatattccggaaactgccaagaaaaatata
aaggaagttctgactaaagccgagagtgaagtccaagaccttatcgcagcttacgaggca
aaagaactggaacctttgccaggaaggacccttgacgaaaccattgaaatgaagatcatg
cagaccctgggtaaggcaagggaccagacaggtaacattgcaggtaatgagcttggtctg
gaaaattctgctgtgataatggccaagtccggagcaagaggttccatgctgaacctcaca
cagatggctgcctgcgttggacagcaggcagtgcgtggtgaacgtatcaggagaggatat
gcaggaagaacacttcctcactttgacaaaggagatctgggagccgatgcacatggattt
gtcaaagccagctataaaagtggattatctcctactgaatacttcttccactccatagga
ggacgtgaaggtcttgtggacactgcggtacgtacatcccagtcaggatatctgcaaaga
agactggtaaacgctctccaagaccttgaagtgcaatatgatgctactgtgagagaaacg
aggggtgttatagtgcagttcaagtacggagaagatggtatagactcaactaagagcgac
tacagtaagcctgaaaacgtacataagatagtagaagcagtgacaggaaagaaggtgaac
tga
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