Mycobacterium intracellulare ATCC 13950: OCU_29890
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Entry
OCU_29890 CDS
T02158
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03030
DNA replication
mia03410
Base excision repair
mia03420
Nucleotide excision repair
mia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCU_29890
03410 Base excision repair
OCU_29890
03420 Nucleotide excision repair
OCU_29890
03440 Homologous recombination
OCU_29890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mia03032
]
OCU_29890
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_29890
Enzymes [BR:
mia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCU_29890
DNA replication proteins [BR:
mia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OCU_29890
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OCU_29890
NER (nucleotide excision repair)
GGR (global genome repair) factors
OCU_29890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
HHH_5
NYN_YacP
DNA_pol_A_exo1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AFC44208
UniProt:
H8IQK9
LinkDB
All DBs
Position
complement(3177686..3180412)
Genome browser
AA seq
908 aa
AA seq
DB search
MKAVPATKTATKASEEQTRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAM
LINLLRDEAPTHIAAAFDVSRQTFRSERYPEYKANRSATPDEFHGQIDITKEVLAALGIT
VLAEPGFEADDLIATLATQAENEGYRVLVVTGDRDSLQLVSENVTVLYPRKGVSELTRFT
PDAVVEKYGLTPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWIGEYGSLQALVDNVDSV
RGKVGDALREHLASVIRNRELTDLVKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLR
DRLFETLAAVEPEVDEGFDVRGGALEAGELAVWLAEHSSGKRFGLAVVGTHLAYDADATA
LAIVSADGEGRYIDTATLDPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVT
SDTALAAYLVRPGQRSFSLDDLSLRYLRRELRAENPEQQQLSLLDDTDGTDDQAVQTLLL
RAVAVLDLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLELLTELQSDFAH
LIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTDADALQSLFDKTG
HPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGDGYSELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVASRA
FGVPIEEVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKDQMEQYFARFGGVRDY
LMAVVEQARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI
ETDKAIKDAGLSSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYG
RSWDAAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccgtgcccgccacgaaaaccgctacgaaggccagcgaggaacagaccaggccg
acgctcatgctgctggacggcaactccctggcgttccgggcgttctatgcgctgcccgcc
gagaacttcaagacccgcggggggctgaccaccaacgcggtctacggcttcaccgccatg
ctgatcaacctcctgcgcgacgaagcccccacccacatcgccgcggccttcgacgtgtcg
cggcagaccttccgctccgagcgctatccggagtacaaggccaatcggtcggcgacgccc
gacgagttccacggccagatcgacatcaccaaggaggtcctggccgccctgggcatcacg
gtgctcgccgagccgggcttcgaggccgacgacctgatcgccaccctggccacccaggcc
gaaaacgagggctaccgcgtgctggtggtcaccggcgaccgcgattcgttgcaattggtc
agcgagaacgtgacggtcctctacccccgcaagggggtgagcgaattgacccgcttcacc
ccggacgcggtcgtcgagaagtacggactgacgcccacgcagtaccccgacttcgccgcg
ctgcgcggcgaccccagcgacaacctgcccggcatccccggtgtgggggagaagaccgcc
tccaagtggatcggcgagtacgggtcgctgcaggcgctggtcgacaacgtcgattcggtg
cgcggcaaggtgggcgacgcgctgcgcgaacatctggccagcgtgatccgcaaccgcgag
ctcaccgatctggtcaaagacgtgccgctggcccagactcccgacacgctgcggctgcaa
ccgtgggaccgcgaccagatccaccggctcttcgacgacctggagttccgggtgctgcgc
gaccggctgttcgaaaccctggccgcggtggagcccgaggtcgacgagggcttcgacgtg
cgcggcggcgcgctggaagccggcgagctggcggtgtggctggccgagcacagctcgggg
aagcgcttcgggctggccgtcgtcggcacccacctggcctacgacgccgacgccaccgcg
ctggccatcgtctccgccgacggcgagggccgctacatcgacaccgcgacgctggatccc
gaagacgaggcggcgctggcgtcctggttggccgaccccgggccgcccaaggcgctacac
gaagccaagctggccatgcacgacctggccgggcggggctggacgctggccggcgtcacc
tccgacaccgcgctggcggcctacctggtgcgccccgggcagcgcagcttctccctcgac
gacctgtcgctgcgctacctgcgccgcgagttgcgggccgaaaaccctgagcagcaacag
ctttcgctgctcgacgacaccgacggcaccgatgaccaggcggtgcagacgctgctgttg
cgtgccgtggcggtgctggatctggccgacgcgctcgacgaggagctggcccgcatcaac
tcgacctcgttgctcagcggcatggagcttccggtgcagcgggtgctggcggggatggaa
aacgccggcatcgccgtcgatttggagttgctgaccgagctgcagagcgacttcgcccac
ctgatccgcgacgcggccgaagcggcgtacgcggtgatcggcaagcagatcaacctgggc
tcgccgaaacagttgcaggcggtgctcttcgacgagctggagatgccgaagaccaagcgc
accaagaccggatacaccaccgacgcggacgcgctgcagtcgctgttcgacaagaccggt
cacccgttcctgcaacatctgctggcccaccgcgacgccaccaggctcaaggtcaccgtc
gacgggctgctgaattcggtggcctccgacgggcgcatccacaccacgttcaaccagacc
atcgcggccaccggcaggttgtcctcgaccgagccgaacctgcagaacattccgatccgc
accgaggccggccggcggatccgcgacgcgttcgtggtcggcgacggctacagcgagctg
atgaccgccgactacagccagatcgagatgcggatcatggcccacctgtccaaggacgag
gggctcatcgaggcgttcaacaccggggaggacctgcactcgttcgtcgcctcccgcgcc
ttcggcgtgccgatcgaggaggtcaccgccgaactgcgccgccgggtcaaggccatgtcc
tacgggctggcctatggattgagcgcctacgggctgtccgcccagctcaagatctccacc
gaagaggccaaagaccagatggagcagtacttcgcccggttcggcggagtccgcgactac
ctgatggccgtggtggaacaggcccgcaaggacggctacacgtcgacggtgttcggccgc
cgccgctatctgcccgaactcgacagcagtaaccgccaggtgcgcgaggccgccgagcgg
gcggcgctcaacgcgcccattcagggcagcgccgccgacatcatcaaggtggcgatgatc
gaaaccgacaaggcgatcaaggacgccgggctgtcctcccggatcctgctgcaggtgcac
gacgagctgctgttcgaggtcgcggcgggggagcgcgagcagctcgaagcgttggcccgc
gacaagatgggcggcgcctacccgttggacgtcccgctcgaggtttcggtgggctacggc
cgcagctgggacgctgcggcgcactga
DBGET
integrated database retrieval system
