Micromonospora sp. HM134: FJK98_07940
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Entry
FJK98_07940 CDS
T06145
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mich
Micromonospora sp. HM134
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mich03009
]
FJK98_07940 (rimO)
Enzymes [BR:
mich01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FJK98_07940 (rimO)
Ribosome biogenesis [BR:
mich03009
]
Prokaryotic type
ribosomal protein modification factors
FJK98_07940 (rimO)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDY11507
UniProt:
A0A518WQM0
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All DBs
Position
1709191..1710642
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AA seq
483 aa
AA seq
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MLTLGCARNEVDSEELAARLHADGWQVTTDGEGADVVVVNTCGFVEKAKQDSIQTLLAAA
DTGAKVVAAGCMAERYGRELADSLPEAQAVLSFDDYPDIAARLDAVLAGETVDAHTPRDR
RELLPLTPVARRESAVSLPGHGTPARVAPETDEHTPAHLRQVLRRRLDTGPVASLKLASG
CDRRCAFCAIPAFRGAFVSRTPDELLAEAEWLAKTGVRELVLVSENSTSYGKDLGDPRAL
EKLLPQLAAIDGIVRVRASYLQPAETRPGLVEAIATTPGVAPYFDLSFQHSSEPVLRRMR
RFGSTDRFLELLASARALAPEAGARSNFIVGFPGETRQDVAELTRFLTEARLDAIGVFDY
SDEDGTEAAGLPGKLSAATVKRRYDRLAALADELCSQRAEERLGSTVEVLVDTVDDGVVE
GRAAHQAPEVDGSTTLVAPVGGGVDLAALRPGDLVRATVTATEGVDLVAVPDEMISAAPG
AER
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ctgctgaccctgggctgcgcccgcaacgaggtcgactcggaggagttggccgcccggctg
cacgccgacggctggcaggtcaccaccgacggcgagggtgccgacgtggtggtcgtcaac
acctgcgggttcgtggagaaggccaagcaggactcgatccagaccctgctcgccgccgcc
gacaccggggcgaaggtggtcgccgccggctgcatggccgagcggtacggccgggagttg
gccgacagcctccccgaggcgcaggcggtgctcagcttcgacgactaccccgacatcgcc
gcccggctcgacgcggtgctggccggcgagacggtcgacgcgcacaccccccgggaccgc
cgcgagctgctgccgctgaccccggtcgcccggcgggagtcggcggtgtcgctgcccggc
cacggcaccccggcccgggtcgcgccggagaccgacgagcacaccccggcgcacctgcgg
caggtgctgcgccgccggctcgacaccggcccggtggcctcgctgaagctggccagcggc
tgcgaccggcggtgcgcgttctgcgcgatccccgcgttccggggcgcgttcgtctcgcgt
acccccgacgagctgctcgccgaggcggagtggctggccaagaccggcgtccgtgagctg
gtgctggtcagcgagaactcgacgtcgtacggcaaggacctgggcgacccgcgggcgttg
gagaagctactgccgcagctcgccgcgatcgacggcatcgtccgggtgcgggccagctac
ctccagcccgccgagacccgccccggcctggtcgaggcgatcgccaccacccccggcgtg
gccccctacttcgacctgtcgttccagcactccagcgagccggtgctgcgccggatgcgc
cggttcggctccaccgaccggttcctggagctgctggcgagcgcccgcgctttggccccg
gaggcgggcgcgcggagcaacttcatcgtcggtttccccggcgagacccggcaggacgtg
gccgagctgacccgcttcctgaccgaggcgcggctggacgcgatcggcgtgttcgactac
agcgacgaggacggcaccgaggccgccgggctgcccggcaagctctccgccgccaccgtc
aagcgccgctacgaccggctcgccgcgctcgccgacgagttgtgctcgcagcgggccgag
gaacgcctcggcagcaccgtcgaggtgcttgtcgacacggtcgacgacggtgtggtggag
ggccgggcggcgcaccaggcccccgaggtcgacggctcgaccaccctggtcgccccggtc
ggcggcggggtcgacctggccgcgttgcgccccggcgacctggtccgggccacggtcacc
gcgaccgagggcgtcgacctggtcgccgtgccggatgagatgatctcggcggcgcccggc
gcggaacggtga
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