Mangifera indica (mango): 123193051
Help
Entry
123193051 CDS
T07684
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123193051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123193051
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123193051
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123193051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF1930
Motif
Other DBs
NCBI-GeneID:
123193051
NCBI-ProteinID:
XP_044461758
LinkDB
All DBs
Position
12:7047882..7063799
Genome browser
AA seq
1173 aa
AA seq
DB search
MANKKQAADFEPLRQLVRHHIESFDYMLEEGLNEMFDRIRPVVVHDSFTNRKLKISVGNP
EIFPPQKEHGSKTMRDVLLPFECRQAKISYAGKLMADVEFQYDDSAVIREKFNFGQFPIM
LKSKCCHLRDGDPQKLKSLKEEASEVGGYFILNGLERVFRAVILPKQNYPMSMVRNSFRD
RREGYTDKAVIMRCVRKDQSSVSVKLYYLRNGSARLGFWMQGKEYLLPVGIVLKALVDTN
DHEIYDNLTCCYGEKYEKEKGAIGSQLVGERAKIILDEVRDLSLFTRLQCLQHIGEHFQP
VMDGLRKESYYVVAETVLRDYIFVHLDDNHDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQ
NQEILLPGHLITIYLKEKIEDWLQKAKKLLQDELEKDSKTFDFFSLAHIKKVIDKNPSRS
LSSAIEAMLKTGRMVTQSGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTS
VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRVTSYYDSQGNIRDFSKIRSSILSVLI
GVGVVPSLPKLVKAGPPAVLSVLLDGRVVGAIPSSEVEKAVAHLRRLKVLASSVIPDDLE
VGYVPLSMGGAYPGLYLFTSPPRFVRPVRNISLPPEESQNIELIGPFEQVFMEISCPDGG
NGGRSNGFSATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSLQAIKHR
ADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDR
GMCHGQIYQTETIDLADDGSKSDRSQKMFRRNRDNKSMHPVIDTDGLPYVGQLIHPGEPY
CSIYDKTTNSWRMNTRKGSEPVFVDYVAVDMKSSKNLLQKANIRFRHTRNPIIGDKFSSR
HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGALHGKFM
DATPFPNSVKKANGEAGSESESLVDEFGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTIDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLH
DRLHTCSDYHVADVCSICGSMLTTSFIQPQRRAVREIGGLPPARAPKKVTCHACQTSKGM
ETVAMPYVFRYLAAELAAMNIKMTLQLTNGAES
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagaaacaagcggcggacttcgagccgctgcggcagctggtcaggcaccac
atagagtccttcgattacatgctggaggaaggtttgaatgagatgttcgatcgcatcagg
cccgttgttgttcatgattctttcaccaatagaaagcttaaaatatcagtgggtaatcct
gaaatatttccacctcaaaaggaacatggctccaagacaatgcgggatgtgttactccct
tttgaatgtagacaggctaaaatatcatacgctggcaagttaatggcagatgttgaattt
cagtatgatgactctgcagttattagagagaaattcaattttgggcaatttcctataatg
ttaaagtctaaatgttgtcatctacgagatggtgatcctcaaaaattaaaatctttaaag
gaggaggcatcagaagttggtggttatttcattctgaatgggctggagagagtttttcgg
gctgtaatattaccaaagcaaaactacccaatgagtatggttcggaattcctttcgtgat
cggcgagaaggatatactgataaagcagttatcatgaggtgtgtaagaaaagatcaatcc
tcagtatcagttaaattgtattaccttcgtaatgggagtgcaaggcttggtttctggatg
caggggaaggaatacttacttccagtcggcattgttttaaaggcccttgttgacactaat
gatcatgagatttatgacaatttaacatgctgctatggagaaaaatatgagaaggaaaag
ggagctattggctcacagctggtgggtgaacgggctaaaattattcttgatgaagtccgg
gatttgtctcttttcacccgtcttcaatgtctacaacatatcggagagcacttccaacct
gttatggatggactcagaaaagaaagttattatgttgttgctgaaactgtcctcagggat
tacatctttgttcaccttgatgacaatcatgacaagttcaatctactaatctttatgttg
cagaaacttttctcacttattgatcagacttctgtgccagacaacccagactccttgcag
aatcaagaaatcttacttcctggtcacttgattaccatttatcttaaggaaaaaatagaa
gattggctacagaaggcaaagaaactacttcaagatgagttagagaaggacagcaaaaca
ttcgatttctttagcttagctcatataaagaaagtcattgataaaaatccttcgaggagc
ctcagttcagcaattgaggctatgttgaaaactggaagaatggttactcaatcaggacta
gatttgcagcagagagctggttatacagttcaggcagagaggcttaactttttacgtttc
atttcattctttcgtgctgtgcatcgaggggcttcatttgctgggcttcgtacgaccagc
gtgcggaagttgctacctgaatcttggggtttcctttgccctgtgcacacacctgatggg
gagccatgtgggctcctgaaccatatgacatcttcttgtcgagttacgtcgtattatgat
tcacaaggaaatatcagagatttttcaaaaattagatcatctattctcagtgttctaatt
ggggttggggtggtgccttcgttgcctaagcttgttaaagctggtcctcctgcagttctc
tctgttcttttagatggtcgtgttgttggtgctataccttcaagtgaagttgagaaagct
gttgctcatttaaggagactgaaagtgctagcttcttcagtgattcctgatgatctggaa
gtgggatatgttcctttgagcatgggtggagcatatcctggtttgtacctgtttacatct
cctcctagatttgttcggccagttagaaatatatctctccctcctgaggaaagtcaaaat
attgaactcattgggccatttgaacaggtcttcatggagataagttgtcctgatggtgga
aatgggggaagaagtaacggtttttctgcaactcatgaagaaattcatcctactgggatg
ctcagtgtagttgcaaatctaacaccttattctgatcataatcaaagtccacgtaatatg
tatcaatgtcagatggcaaaacaaacaatgggtttctcattacaagctattaagcaccgt
gctgatcagaaattgtaccatcttcagactcctcaaactcctattgtgcgcactagtact
tatacaaagtacaacatagatgaatatccaactgggacaaatgcaatagttgcagtgctg
gcatacacagggtatgatatggaggatgccatgatcttaaacaagtcatctgtggatcgt
gggatgtgccatggacaaatataccagacggaaactattgacttggctgatgatggtagc
aagtcagatcgaagccaaaaaatgtttagaaggaatagagataataaatctatgcaccct
gtgattgatacagatggacttccatatgttggtcagttgatacatccgggtgaaccatac
tgtagcatttatgataagacgacaaattcatggagaatgaacacccgaaaaggttcagaa
cctgtttttgttgactatgttgctgttgatatgaaaagcagcaagaaccttcttcaaaag
gctaatatacggttccgacatactagaaatcctattattggtgataaatttagcagtaga
catgggcagaaaggtgtttgctcccagttgtggccagacattgatatgccattttctgga
gtcacaggaatgcgtccagatttgattatcaatccacacgcatttccttctagaatgaca
atcgctatgcttttagagtctgttgctgcaaagggtggtgccttgcatggaaaatttatg
gatgcgacgccatttccaaattcagtcaagaaagctaatggcgaggctggatcggaatct
gaatcacttgtggatgagtttggtgaaatgttgaggacttgtggctttaattatcatggt
gtggaggtattatacagtggtgtttatggaactgaactgacatgtgaaatttttattgga
cctgtgtattatcagcgactccgacacatggtttcagacaaatttcaggttcgttccact
ggaacaatagaccaaatcacccggcagccaatcaaaggaagaaagcgtggtggaggtatc
cgttttggagaaatggaacgagattccatgctagctcatggagcagcatatttgttgcat
gataggcttcatacgtgttcggattatcatgttgcggatgtgtgctccatttgtggaagt
atgcttacaacctcattcattcagccacagaggcgggcagtgcgagagattggtggacta
ccccctgcaagagcacccaaaaaggtaacttgtcatgcttgccagacaagtaaaggaatg
gagacggtagccatgccttatgtttttagatacttggccgctgagcttgctgccatgaac
ataaaaatgacccttcagctaactaacggagctgagtcctaa
DBGET
integrated database retrieval system
