Mangifera indica (mango): 123204085
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Entry
123204085 CDS
T07684
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123204085
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
minc01009
]
123204085
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123204085
03036 Chromosome and associated proteins [BR:
minc03036
]
123204085
Protein phosphatases and associated proteins [BR:
minc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123204085
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123204085
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123204085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EZ
Htt_N-HEAT_1
Adaptin_N
Cnd1
SCD
TAF6_C
CLASP_N
Arm
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
123204085
NCBI-ProteinID:
XP_044476565
LinkDB
All DBs
Position
20:complement(10130600..10137642)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGLEHANVLLPPLETLCTVEETCVRDKSVESLCRIGSQMREQ
DLVEYFIPLVKRLAGGEWFTARVSSCGLFHIAYPSAPEALKTELRTIYRQLCQDDMPMVR
RSAATNLGKFAATVESTHLKSEIMYIFEELTQDEQDSVRLLAVEGCGALGKLLEPQDCVA
HILPVIINFSQDKSWRVRYMVANQLYELCEAAGPEPTRTDVVPAYVRLLRDNEAEVRIAA
AGKVTKICRILNPELAIQHVLPCVKELSTDSSQHVRSALATVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIVPQV
LDMIKNSHYLYRMTILHAIALLAPVMGSEITCSKLLPEVINASKDRVPNIKFNVAKVLQS
LIPIVNQSVVEKTIRPCLVELSEDPDVDVRFFATQALQSSDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgatgagccactttacccaattgcagtgctaattgatgagctaaaaaat
gatgatattcagcttcggttgaactcaatccggcggctatcaactattgctcgtgctctt
ggggaggagaggactcggaaggagttgataccctttttgagcgagaacaatgacgatgat
gacgaagtacttcttgcaatggctgaagaattgggagttttcattccttatgttggtggt
ttggagcatgcaaatgtgttgcttcctccactggagactttgtgcactgttgaggaaact
tgtgtgagggacaagtcagtggagtcattgtgtaggattggttcacagatgagggaacaa
gatctggttgagtattttattccattagtgaagagactggctggtggtgagtggtttaca
gctcgagtctcctcatgtggtttgtttcatattgcatacccaagtgctccagaagcattg
aaaactgaacttcggacaatatacaggcaactgtgccaagatgacatgcccatggttagg
agatctgctgcaacaaaccttggaaaatttgctgctaccgttgaatctacccatttgaag
tctgaaatcatgtatatatttgaggaattgacacaggatgagcaagattctgttcggttg
ttggctgttgagggttgtggagctctaggaaagttgttggaaccccaagattgtgtggca
catattctacctgttataattaatttctcccaggataagtcttggcgtgttcgttacatg
gttgcaaatcaattatatgagctatgtgaagctgctggtcctgagcctaccaggacggat
gtggttcctgcatatgttcggctacttcgtgataatgaagctgaagtacgtattgctgct
gcaggaaaagtaacaaaaatttgccggattttgaatccagaacttgcaatccagcatgtt
cttccttgtgtgaaggaattgtcaacagattcatctcagcatgttcgttctgctttagct
acagttataatgggaatggctccagtgttaggaaaggatgcaacaatagagcaactgctg
ccaattttcctttctcttctaaaggatgaatttcctgatgtccggcttaatattattagc
aagcttgatcaagtgaaccaggtgattggaattgatctgctatcccaatctctgttgcca
gctattgttgagcttgcagaggatagacactggagggttcgacttgcaataattgaatac
ataccattgttggcaagtcagttgggtgttgggttctttgatgataagcttggtgctctt
tgcatgcaatggttgaaagacaaggtttattccattcgtgatgctgctgctaataatgtg
aagcgtcttgcagaagaatttggcccagagtgggccatgcagcacatagttccacaggtt
ttggatatgattaagaactcacattatttgtatcgtatgaccattctacatgcaattgct
ctgcttgcccctgttatgggctctgaaattacttgttcaaagcttctgcccgaggttata
aatgcatcaaaagatagggtaccaaacatcaaattcaatgtggcgaaggtgttgcagtca
cttattcccattgtcaaccaatctgtagtcgagaagacaatccgtccatgtttggtcgag
ctgagtgaggatccggatgttgatgtccgattttttgctacccaagccctacagtcaagc
gatcaggtcatgatgtccagttag
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