Mangifera indica (mango): 123216973
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Entry
123216973 CDS
T07684
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123216973
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
minc01009
]
123216973
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123216973
03036 Chromosome and associated proteins [BR:
minc03036
]
123216973
Protein phosphatases and associated proteins [BR:
minc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123216973
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123216973
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123216973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EZ
PDS5
Adaptin_N
Cnd1
TAF6_C
CLASP_N
Motif
Other DBs
NCBI-GeneID:
123216973
NCBI-ProteinID:
XP_044493625
LinkDB
All DBs
Position
5:11302090..11309199
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCSVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMVR
RSAASNLGKFAATVEPAHLKTDIMSIFEDLTQDDQDAVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKDLSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LDMISNPHYLYRMTILRAVSLVAPVMGSEITCNKLLPVVIHASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgaaccactatacccaatagctgtcctcatagatgaactgaaaaat
gatgacatccagcttaggttgaactcgatccgtagattgtcaacaattgcacgtgctctt
ggggaggagcggacaaggaaggaattaattccctttttgagtgaaaacaatgatgacgac
gatgaggtgcttctcgcaatggcagaagagttgggggtgtttattccatatgttggtgga
gttgaacatgcccatgttttgcttccgcctttggagacactttgctctgtcgaggagacc
tgtgtgagggacaaagctgtggagtctctgtgtaggattgggtcgcagatgagggagagt
gacttggttgactggtttattcctctggttaagaggctagcagctggtgaatggtttaca
gctcgagtatctgcttgtgggctgttccacattgcctaccctagtgccccagatatcttg
aagacagagttgcggtcaatatatacccagttgtgccaagatgacatgcccatggttagg
agatctgctgcatcaaatctagggaaatttgctgcaactgttgaacctgctcatttgaag
actgacatcatgtcaatatttgaggatcttacacaggatgatcaagatgctgtacgacta
ttggctgttgagggttgtgcagctcttggaaaattgttggagcctcaggattgtgttgca
catattctccctgttatagtaaatttctctcaggacaagtcttggcgtgtgcgctacatg
gttgcaaatcaattatatgaactttgtgaagctgtggggcctgagccaactaggacggac
ttggtccctgcatacgtgcgattacttcgagataatgaagctgaagtacgtatagcagct
gctggcaaagtaactaagttttgccggattctaaacccagaactggcaattcaacacatt
cttccttgtgtgaaggatttgtcatcagattcttcccagcatgtccgctctgctctggct
tctgtaataatggggatggcccccgttctaggaaaggatgcgacaattgagcaacttctt
ccgatatttctctctcttttgaaggatgaatttcctgatgtgagacttaatattatcagc
aagcttgatcaagtgaaccaggttattggaattgatctattgtctcaatccttactacct
gcaattgttgaacttgctgaggatagacattggagggttcgtcttgcaataatagagtat
atacctttattggccagccagttgggtgtaggtttttttgatgataaacttggtgctctt
tgcatgcagtggttacaggataaggtttattctatccgtgatgctgctgctaacaatttg
aagcgccttgctgaagaatttggtccagagtgggcaatgcagcacataattcctcaggtg
ttggacatgattagcaatccccactatttgtatcggatgaccattttgcgtgctgtctct
ctggtagcccctgttatgggatcagaaattacttgtaataaattgttgccagtggtcatc
catgcatcaaaagacagggtacccaacataaagttcaatgttgcaaaggtgttgcagtct
ctcattccaattgttgaccagtctgtggtggaaaagacaatccgtccaagcttggttgag
cttagtgaggatccagatgttgatgtccgtttctttgccaatcaagccctacagtcgatc
gaccatgtgatgatgtctagctag
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