Methylobacterium indicum: mvi_04260
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Entry
mvi_04260 CDS
T07581
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mind
Methylobacterium indicum
Pathway
mind03030
DNA replication
mind03410
Base excision repair
mind03420
Nucleotide excision repair
mind03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
mvi_04260 (polA)
03410 Base excision repair
mvi_04260 (polA)
03420 Nucleotide excision repair
mvi_04260 (polA)
03440 Homologous recombination
mvi_04260 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mind03032
]
mvi_04260 (polA)
03400 DNA repair and recombination proteins [BR:
mind03400
]
mvi_04260 (polA)
Enzymes [BR:
mind01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
mvi_04260 (polA)
DNA replication proteins [BR:
mind03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
mvi_04260 (polA)
DNA repair and recombination proteins [BR:
mind03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
mvi_04260 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
mvi_04260 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BCM81965
UniProt:
A0A8H9C4F1
LinkDB
All DBs
Position
442963..446025
Genome browser
AA seq
1020 aa
AA seq
DB search
MSTETAPETKPVGPGDQVLLVDGSSFIFRAYFQSINQPERYNFRPSDGLPTGAVRLFCAK
LAQFVQEGAAGVVPTHLGIVFDKSEGSFRKEIFPDYKGHRPDAPDDLKRQMPLMRDAVRA
FGLHPIELQRYEADDLIATYSRQAEARGAGVIIVSSDKDLMQLVGDLVRFYDFESGQKGK
PGYRPERNLDRAAILERWEGLGPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFGS
LEALLDKAATIKQPKRRETLLANIDQARLSRRLVALDEAVPVPVPLDDLRLPKPDPERLV
GFLKAMEFNTLTRRIAQMLHVDPEAVRPDPSLLPAGADSGFSNEKGGSDVTPFFGDTPDG
APASAAAEVDPFADLALPDGPPKPKAPTEATPTTLVAARAAESVKPFDTAAYQTVTTVES
LESWIAEAVEAGIVAVDTETTALDANKADLVGVSLATAPGQACYIPLSHRGGEDLFGGGL
LPGQLSWEAVQTRLKPLLENPAVLKIGQNVKYDWLVLARHGIEVRPFDDTMLISYVLDAG
KGSHGMDELARRHLGHQPITFADVAGTGRQKITFDRVALDKATAYAAEDADVTLRLWRLM
KPRLAAERRATVYETLERPLVPVLARMEREGIKVDRQMLSRLSGDFAQSLARLEDEIQEM
AGEKFSVSSPKQIGDILFGKMGLPGAKKTPSGQWATPATLLEELAGQGHDLPRRILEWRQ
LSKLKSTYTDSLQEHADRGTDRVHTSFALAATTTGRLSSSDPNLQNIPVRTEEGRRIRQA
FVADAGHKLISADYSQIELRLLAHIADIPQLRQAFEDGIDIHAATASAMFGVPLDQMTSD
LRRKAKTINFGIIYGISAFGLADRLGIPQGEAAAFIKQYFERFPGIRAYIDDTKKLCRDK
GYVTTLFGRVCHYPQIRSNNPQERASVERQAINAPIQGTAADIIRRAMARMEGALAEAGL
ATRMLLQVHDELVFEAPDDEVDRALPIIARVMEEAPHPAVTLRVPLAVEAKAALNWQEAH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgagaccgcccccgagacgaagcccgtcggccccggcgatcaggtgctcctg
gtcgacggctcgtcgttcatcttccgggcctatttccagtcgatcaaccagcccgagcgc
tacaacttccggccctccgacgggctgccgaccggggcggtgcggctgttctgcgccaag
ctcgcgcagttcgtgcaggagggcgcggccggcgtggtgccgacccatctcggcatcgtg
ttcgacaagtccgagggctcgttccggaaggagatctttccggactacaagggccaccgg
cccgacgcgcccgacgacctcaagcgccagatgccgctgatgcgcgacgcggtgcgcgcc
ttcggcctgcacccgatcgagttgcagcgctacgaggccgacgacctgatcgcgacctat
tcccgccaggccgaggcgcggggggcgggcgtgatcatcgtgtcctccgacaaggacctg
atgcagctcgtcggcgatctcgtgcggttctatgatttcgaatcgggccagaagggcaag
ccgggctaccggcccgagcgcaacctcgaccgcgccgccatcctggagcgctgggagggc
ctggggcccgagcagatcggcgacgccctggcgctgatcggcgacacctccgacaacgtg
ccgggcgtgccgggcatcggcctgaagaccgccgcagcgctcatcaaggagttcggcagc
ctggaggcgctgctcgacaaggccgccaccatcaagcagcccaagcggcgcgagacgctg
ctcgccaacatcgaccaggcccgcctgtcgcgccgcctcgtcgccctcgatgaagcggtg
ccggtgccggtgccgctcgacgacctcaggcttccgaagcccgaccccgagcgcctggtc
ggcttcctcaaggcgatggagttcaacaccctgacgcgccgcatcgcccagatgctgcac
gtcgaccccgaggcggtgcgccccgacccctcgctcctgccggcgggcgccgattcgggc
ttctcgaacgagaagggcggcagcgacgtcacgccgttcttcggcgacacgccggacggc
gcccccgcttcggccgcggccgaggtcgatcccttcgccgatctcgccctgccggatggg
ccgcccaagcccaaggccccgaccgaggcgacgcccaccaccctggtggcggcgcgcgcg
gcggaatcggtcaagccgttcgacaccgccgcttaccagaccgtcaccacggtcgagagc
ctggaatcctggatcgccgaggcggtcgaggcgggcatcgtcgcggtcgataccgagacg
accgcgctcgacgccaacaaggccgacctcgtcggcgtctcgctcgccaccgcgccgggc
caggcctgctacatcccgctcagccatcgcggcggcgaggacctgttcggcggcggcctg
ctgccggggcagctctcctgggaggccgtgcagacgcgcctgaagccgctgctggagaat
ccggcggtgctcaagatcggccagaacgtcaagtacgactggctggtgctcgcccgccac
ggcatcgaggtccggcccttcgacgacacgatgctgatctcctacgtgctcgatgccggc
aagggctcgcacggcatggacgagctcgcccgccgccatctcggccaccagccgatcacc
ttcgcggacgtcgccgggaccgggcgccagaagatcaccttcgatcgtgtcgccctcgac
aaggccacggcctacgcggccgaggacgccgacgtgaccctgcggctgtggcggctgatg
aagccgcggctcgccgccgagcgccgcgccaccgtctacgagaccctggagcggcccctc
gtgccggtgctggcgcggatggagcgcgagggcatcaaggtcgatcgccagatgctgagc
cggctctcgggcgatttcgcccagtcgctggcgcggctcgaggacgagatccaggagatg
gcgggggaaaagttctccgtctcgtccccgaagcagatcggcgacatcctgttcggcaag
atgggcctgcccggcgccaagaagaccccgtccggccagtgggcgacccccgcgaccctg
ctcgaggagctggccggccagggtcacgacctgccgcgccggatcctcgaatggcgccag
ctctcgaagctgaaatcgacctacaccgacagcctgcaggagcacgccgaccgcggcacc
gaccgggtccacacctccttcgcgctcgccgcgaccacgaccggacgcctctcctcgtcg
gaccccaacctccagaacatcccggtccggaccgaggagggccggcgcatccgccaggcc
ttcgtggccgatgccgggcacaagctgatctcggccgattacagccagatcgagttgcgc
ctgctcgcccacatcgccgacatcccgcagctgcgccaggccttcgaggacggcatcgac
atccacgcggccaccgcctcggcgatgttcggcgtgcccctcgaccagatgacctcggac
ctgcgccgcaaggccaagaccatcaatttcggcatcatctacggcatctcggccttcggc
ctcgccgaccggctcggcatcccgcagggcgaggccgcggccttcatcaagcagtatttc
gagcgcttccccggcatccgcgcctatatcgacgacaccaagaagctctgccgcgacaag
ggctacgtcacgaccctgttcggccgggtctgccactacccgcagatccgctccaacaac
ccgcaggagcgcgcctcggtcgagcgccaggcgatcaacgcgccgatccagggcacggcc
gccgacatcatccggcgggcgatggcccggatggagggcgcgctggcggaagccggcctc
gcgacccggatgctgctccaggtccacgacgagctcgtgttcgaggcgcccgacgacgag
gtcgaccgcgcgctgccgatcatcgcccgggtgatggaggaggcgccccacccggccgtc
accctgcgggttcccctcgccgtcgaggccaaggcagccttgaactggcaggaggcgcat
tga
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integrated database retrieval system