KEGG   Methylobacterium indicum: mvi_04260
Entry
mvi_04260         CDS       T07581                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mind  Methylobacterium indicum
Pathway
mind03030  DNA replication
mind03410  Base excision repair
mind03420  Nucleotide excision repair
mind03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mind00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    mvi_04260 (polA)
   03410 Base excision repair
    mvi_04260 (polA)
   03420 Nucleotide excision repair
    mvi_04260 (polA)
   03440 Homologous recombination
    mvi_04260 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mind03032]
    mvi_04260 (polA)
   03400 DNA repair and recombination proteins [BR:mind03400]
    mvi_04260 (polA)
Enzymes [BR:mind01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     mvi_04260 (polA)
DNA replication proteins [BR:mind03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     mvi_04260 (polA)
DNA repair and recombination proteins [BR:mind03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     mvi_04260 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     mvi_04260 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Taq-exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: BCM81965
UniProt: A0A8H9C4F1
LinkDB
Position
442963..446025
AA seq 1020 aa
MSTETAPETKPVGPGDQVLLVDGSSFIFRAYFQSINQPERYNFRPSDGLPTGAVRLFCAK
LAQFVQEGAAGVVPTHLGIVFDKSEGSFRKEIFPDYKGHRPDAPDDLKRQMPLMRDAVRA
FGLHPIELQRYEADDLIATYSRQAEARGAGVIIVSSDKDLMQLVGDLVRFYDFESGQKGK
PGYRPERNLDRAAILERWEGLGPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFGS
LEALLDKAATIKQPKRRETLLANIDQARLSRRLVALDEAVPVPVPLDDLRLPKPDPERLV
GFLKAMEFNTLTRRIAQMLHVDPEAVRPDPSLLPAGADSGFSNEKGGSDVTPFFGDTPDG
APASAAAEVDPFADLALPDGPPKPKAPTEATPTTLVAARAAESVKPFDTAAYQTVTTVES
LESWIAEAVEAGIVAVDTETTALDANKADLVGVSLATAPGQACYIPLSHRGGEDLFGGGL
LPGQLSWEAVQTRLKPLLENPAVLKIGQNVKYDWLVLARHGIEVRPFDDTMLISYVLDAG
KGSHGMDELARRHLGHQPITFADVAGTGRQKITFDRVALDKATAYAAEDADVTLRLWRLM
KPRLAAERRATVYETLERPLVPVLARMEREGIKVDRQMLSRLSGDFAQSLARLEDEIQEM
AGEKFSVSSPKQIGDILFGKMGLPGAKKTPSGQWATPATLLEELAGQGHDLPRRILEWRQ
LSKLKSTYTDSLQEHADRGTDRVHTSFALAATTTGRLSSSDPNLQNIPVRTEEGRRIRQA
FVADAGHKLISADYSQIELRLLAHIADIPQLRQAFEDGIDIHAATASAMFGVPLDQMTSD
LRRKAKTINFGIIYGISAFGLADRLGIPQGEAAAFIKQYFERFPGIRAYIDDTKKLCRDK
GYVTTLFGRVCHYPQIRSNNPQERASVERQAINAPIQGTAADIIRRAMARMEGALAEAGL
ATRMLLQVHDELVFEAPDDEVDRALPIIARVMEEAPHPAVTLRVPLAVEAKAALNWQEAH
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgagcaccgagaccgcccccgagacgaagcccgtcggccccggcgatcaggtgctcctg
gtcgacggctcgtcgttcatcttccgggcctatttccagtcgatcaaccagcccgagcgc
tacaacttccggccctccgacgggctgccgaccggggcggtgcggctgttctgcgccaag
ctcgcgcagttcgtgcaggagggcgcggccggcgtggtgccgacccatctcggcatcgtg
ttcgacaagtccgagggctcgttccggaaggagatctttccggactacaagggccaccgg
cccgacgcgcccgacgacctcaagcgccagatgccgctgatgcgcgacgcggtgcgcgcc
ttcggcctgcacccgatcgagttgcagcgctacgaggccgacgacctgatcgcgacctat
tcccgccaggccgaggcgcggggggcgggcgtgatcatcgtgtcctccgacaaggacctg
atgcagctcgtcggcgatctcgtgcggttctatgatttcgaatcgggccagaagggcaag
ccgggctaccggcccgagcgcaacctcgaccgcgccgccatcctggagcgctgggagggc
ctggggcccgagcagatcggcgacgccctggcgctgatcggcgacacctccgacaacgtg
ccgggcgtgccgggcatcggcctgaagaccgccgcagcgctcatcaaggagttcggcagc
ctggaggcgctgctcgacaaggccgccaccatcaagcagcccaagcggcgcgagacgctg
ctcgccaacatcgaccaggcccgcctgtcgcgccgcctcgtcgccctcgatgaagcggtg
ccggtgccggtgccgctcgacgacctcaggcttccgaagcccgaccccgagcgcctggtc
ggcttcctcaaggcgatggagttcaacaccctgacgcgccgcatcgcccagatgctgcac
gtcgaccccgaggcggtgcgccccgacccctcgctcctgccggcgggcgccgattcgggc
ttctcgaacgagaagggcggcagcgacgtcacgccgttcttcggcgacacgccggacggc
gcccccgcttcggccgcggccgaggtcgatcccttcgccgatctcgccctgccggatggg
ccgcccaagcccaaggccccgaccgaggcgacgcccaccaccctggtggcggcgcgcgcg
gcggaatcggtcaagccgttcgacaccgccgcttaccagaccgtcaccacggtcgagagc
ctggaatcctggatcgccgaggcggtcgaggcgggcatcgtcgcggtcgataccgagacg
accgcgctcgacgccaacaaggccgacctcgtcggcgtctcgctcgccaccgcgccgggc
caggcctgctacatcccgctcagccatcgcggcggcgaggacctgttcggcggcggcctg
ctgccggggcagctctcctgggaggccgtgcagacgcgcctgaagccgctgctggagaat
ccggcggtgctcaagatcggccagaacgtcaagtacgactggctggtgctcgcccgccac
ggcatcgaggtccggcccttcgacgacacgatgctgatctcctacgtgctcgatgccggc
aagggctcgcacggcatggacgagctcgcccgccgccatctcggccaccagccgatcacc
ttcgcggacgtcgccgggaccgggcgccagaagatcaccttcgatcgtgtcgccctcgac
aaggccacggcctacgcggccgaggacgccgacgtgaccctgcggctgtggcggctgatg
aagccgcggctcgccgccgagcgccgcgccaccgtctacgagaccctggagcggcccctc
gtgccggtgctggcgcggatggagcgcgagggcatcaaggtcgatcgccagatgctgagc
cggctctcgggcgatttcgcccagtcgctggcgcggctcgaggacgagatccaggagatg
gcgggggaaaagttctccgtctcgtccccgaagcagatcggcgacatcctgttcggcaag
atgggcctgcccggcgccaagaagaccccgtccggccagtgggcgacccccgcgaccctg
ctcgaggagctggccggccagggtcacgacctgccgcgccggatcctcgaatggcgccag
ctctcgaagctgaaatcgacctacaccgacagcctgcaggagcacgccgaccgcggcacc
gaccgggtccacacctccttcgcgctcgccgcgaccacgaccggacgcctctcctcgtcg
gaccccaacctccagaacatcccggtccggaccgaggagggccggcgcatccgccaggcc
ttcgtggccgatgccgggcacaagctgatctcggccgattacagccagatcgagttgcgc
ctgctcgcccacatcgccgacatcccgcagctgcgccaggccttcgaggacggcatcgac
atccacgcggccaccgcctcggcgatgttcggcgtgcccctcgaccagatgacctcggac
ctgcgccgcaaggccaagaccatcaatttcggcatcatctacggcatctcggccttcggc
ctcgccgaccggctcggcatcccgcagggcgaggccgcggccttcatcaagcagtatttc
gagcgcttccccggcatccgcgcctatatcgacgacaccaagaagctctgccgcgacaag
ggctacgtcacgaccctgttcggccgggtctgccactacccgcagatccgctccaacaac
ccgcaggagcgcgcctcggtcgagcgccaggcgatcaacgcgccgatccagggcacggcc
gccgacatcatccggcgggcgatggcccggatggagggcgcgctggcggaagccggcctc
gcgacccggatgctgctccaggtccacgacgagctcgtgttcgaggcgcccgacgacgag
gtcgaccgcgcgctgccgatcatcgcccgggtgatggaggaggcgccccacccggccgtc
accctgcgggttcccctcgccgtcgaggccaaggcagccttgaactggcaggaggcgcat
tga

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