Macadamia integrifolia (macadamia nut): 122057181
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Entry
122057181 CDS
T07436
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122057181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122057181
Enzymes [BR:
ming01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122057181
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122057181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
122057181
NCBI-ProteinID:
XP_042475125
LinkDB
All DBs
Position
12:13877979..13941078
Genome browser
AA seq
1504 aa
AA seq
DB search
MEEVKKYATQLELIMEGDIASAKELDLDSDIMCHVTSSEENNYDSKHWQGHKWTSLQYSE
AMSVLNNFIKQKPKKCQNCKAKNPSISSPTSGWIQTRMSDDDIRANTLRRCKMSKTHING
GEQRSVTGEVENANDLPPEFFKQKNFSSGLLLPSDVKDILKLLWENEARLCSLICDIQQE
RLHMSGKEANYSIFFIKALLVPPIKFRPPARGGDSVMEHPQTVLLGKVLQANISLANAPL
NSSEHSRIIPRWMDLQQSVNVLFDSKSVTGQKDNIATGICQLLEKKEGIFRQKMMGKRVN
YACRSVISPDPYLAVNEIGIPPYFAQRLTYPERVTPWNVNKLRDAVINGAEVHPGATQYA
DKLATVKLPPSRKMRISISRKLPSSRGAFTQVGKSLDYEFESKVVYRHLQDGDIVLVNRQ
PTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVN
ANKQYIVPTSGDPIRGLIQDHIISAVLLTKRDTFLTLDEYNQLLYSSGVSASGPGVFNGK
PGQKISIINSEDEIQPVLPAIWKPKPLWTGKQVITAVLNHLTRGRPPFTVEKTGRIPGEY
FGSKSGEANLLIHENELVHGVIDKAQFGKYGLVHTVQEFYGSNTAGILLSAFSRLFTGFL
QMYGFTCGVDDLLIQQLYDMKRSRELEESEKIGEEVHYQFIGCKDQVKDPMELQMEIEKV
IRSNGDSAVARLDRMMSSALNKLTSKVNNMLFPAGLLKPFPRNCLSLMTTTGAKGGLVNF
TQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGFISDRFLTGLRPQEYYFHCM
AGRDGLVDTAVKTSRSGYLQRCLVKNLECLKVCYDHTVRDADGSVVQFNYGEDGVDAHKT
SFITEFKALASNQRIIQERIGGELGSASLFRSDGYIKELPEALKAKAKDFIYRLSGKERE
CLHLTKQKDFMKLLKHKYLSSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHFAGRGEMNVT
LGIPRLQEILMRASDKIQTPVMTCPLQKGRTREEAERLAAKFKKVAVADVIESMEVSVMP
FAVQEGQISPIYKLKLKLYPPLIYPPYMDITLKDCRKTIKNRFLRELEDAIQNHLDMLSK
ISGIKNILQTAQSTSAKEAGEDDLGSKSQEVEENNVGGGDADDDEDDDDGSSEDLGIDAQ
KRKQQATDEVDYDDDMENDNTRMDEHDEGDPSTGFESEIDEVEAEEGNTTIGEIEVFDAD
DETPSKAGSVSKSKSSAKKEKSAIKEKDDSSKQRKRDTDRAFHVEANGLDVEIHFRFTNE
PHILLAQIAQKTARNVYIKKSGKIDRCSVISQNGDPDTPALQTAGVDFHAFWNMQDELDT
RNLVSNDIHAVLKTYGVEAARTTIINEVKAVFGSYGISVNIRHLILIADFMTHSGRYRPM
SRHGIADSVSPLSKMTYETASKFIVEAAYHGETDNLEAPSARICLGLPVKMGTGSFDLMQ
KLEV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtcaagaagtatgctactcaactggaactaataatggagggtgacattgct
agcgcgaaagaattagatctcgatagtgatatcatgtgccatgtgacaagttctgaggaa
aataattacgactccaagcattggcaagggcacaagtggacttctcttcaatatagtgag
gcaatgtctgtattgaacaactttatcaaacagaagcctaaaaaatgtcagaactgtaaa
gccaaaaatccttcaatcagttctcctacttctggttggattcaaacgagaatgtcagat
gacgatatcagagcaaatactctgagaaggtgcaagatgagcaagacacatattaatgga
ggtgaacagagatctgttactggtgaggtggaaaatgctaatgatttgcctcctgagttc
tttaagcagaagaatttttcttcgggactcctcttaccatcagatgtgaaagatatttta
aagcttttatgggaaaatgaggctcgactttgctctcttatatgtgacattcagcaggag
aggttgcatatgtctgggaaagaagctaattattcaattttttttattaaggcccttctt
gttcctccaatcaagttccgcccgccggccaggggtggtgattctgtgatggagcatcct
caaactgttttattaggtaaggtgctgcaggctaatatttctctagccaatgcacctctc
aacagttcagagcattcaaggatcattcctaggtggatggatcttcaacagtctgtgaat
gtattatttgatagcaagagtgtcacaggtcagaaagacaatattgctactggaatatgt
cagttgcttgaaaagaaggagggtatctttcgccagaaaatgatgggaaagagggttaat
tatgcatgtcgttctgtcatatctccagatccctatttggctgtcaatgaaattggtatt
cctccttattttgcacagaggttaacctatccagagagagtgactccttggaatgttaac
aagctgagggatgctgtcattaatggcgctgaggtccatcctggtgctacacagtatgca
gacaaattggcaactgttaaactaccaccaagtagaaaaatgcgtatttcaatttcaagg
aagttaccctcttctaggggagcttttacacaagttggaaagagtttggattatgaattt
gaaagcaaggttgtctatcgtcatttacaggatggagatattgtactagttaaccggcag
ccgacacttcacaagccaagtataatggcacatgtagttcgtgtactgaaaggagagaaa
acacttcgcatgcattatgcaaattgcagtacttacaatgctgattttgatggtgatgag
attaatgttcattttccacaagatgaaatttctcgggcagaagcttacaacattgtaaat
gctaataagcaatacattgttccaacaagtggcgatcctatcagaggcttgattcaggac
catatcataagtgctgtgcttttgacaaagagggacacgtttttaacccttgatgagtac
aatcagcttctctacagctctggtgtctctgcttctggtccaggtgtatttaacggcaaa
cctggccaaaaaatttcaataataaattctgaagatgagatacaacctgtcttgcctgca
atttggaaaccaaagccactgtggacaggaaaacaggtcattactgcagtactaaatcat
ttaacaaggggtcgcccaccatttactgtagaaaagactggaagaattccaggtgaatat
tttggaagcaagagtggcgaagccaacttacttattcatgaaaatgagcttgtacatggg
gtaattgacaaagctcagtttggaaagtatggtctggttcatactgtgcaggagttctat
ggttccaatactgcaggcattctcctttctgcatttagtcgcttgtttactgggtttttg
cagatgtatgggttcacatgtggggttgacgatcttcttatacaacagctatatgacatg
aaaaggagcagggaacttgaagaaagtgaaaaaattggtgaagaggtccattatcagttc
attggttgcaaggatcaagttaaagatcctatggaactgcaaatggagattgaaaaagtt
atacgcagtaatggagattcggcagtggcacgcttggataggatgatgtctagcgctctt
aacaaattgacttctaaggttaacaatatgttgttccctgctgggttactaaaaccattc
cctaggaactgcctgtctcttatgactactactggtgctaaaggtggtttggttaatttt
acacaaatatcatctttgttaggtcaacaagagttagaaggtaaacgggtccctcgtatg
gtttccgggaagaccttaccctgctttcctccttgggattgtgcatctcgtgctggaggt
tttattagtgatcgtttcttgactggactgcgccctcaagaatattactttcattgcatg
gctggccgtgatggtttggttgatacagcagtcaaaacttctcgtagtggatatctgcaa
cgatgccttgtaaaaaatctggagtgtctgaaagtttgttatgaccatactgttcgagat
gcagatggatctgttgtccaattcaattatggggaagatggtgtggatgcccataaaact
agcttcatcacagaatttaaagcacttgcttctaaccaaaggattattcaagaacgtatc
ggtggtgaacttggcagtgcatccttattcagatctgatggttatattaaggagttacca
gaagcacttaaagcaaaagcaaaggatttcatttatcgtctctctgggaaggagagagag
tgtcttcatctgacgaaacagaaggatttcatgaagttgctgaaacacaaatacctctca
agccttgctgagcctggagaacctgttggtgtgatagctgctcagtctgtgggagagcct
tcaacccagatgacactcaacactttccattttgctgggcgaggagaaatgaatgttact
ttgggaatcccacgtttgcaagagattctgatgagggcttcagataaaattcagactcct
gttatgacctgcccattacagaagggtaggacaagggaggaagctgagcgtctagctgca
aagttcaagaaggtagctgtagcagacgtaattgagagcatggaggtctctgttatgcca
tttgctgttcaagagggccaaatctcccctatttataagctgaagttgaagctataccca
cctctaatttatcctccttatatggatattacattaaaagactgccgtaaaaccataaaa
aataggtttctacgggaattggaggatgccattcaaaatcatttggacatgctatctaag
attagtggcataaaaaacattttgcagactgcacaatccacttctgcaaaggaagcaggt
gaggatgatctgggcagtaaatctcaagaagttgaagagaacaatgttggcggtggtgat
gcggatgatgatgaagatgatgatgatggtagttctgaggatctaggcattgatgcacag
aaaagaaaacagcaagctacagatgaggtggattacgatgatgatatggaaaatgataac
acacgtatggatgaacatgatgaaggggatccatccactggctttgagagtgaaatcgat
gaggttgaagctgaagaagggaatactacaattggtgaaattgaggtatttgatgctgat
gatgaaaccccatcaaaggctggatccgtctccaagtcaaaatcaagtgcgaaaaaggaa
aaatcagcaattaaagaaaaggatgacagttcaaaacaaagaaagagagacactgacaga
gcattccacgtggaagctaacggattggatgttgagatccattttagatttaccaacgaa
cctcatattttattggcccagattgcacagaagactgccaggaatgtctatatcaagaaa
tctgggaaaatagatcggtgttcagtgattagccagaatggagatcctgatactccggca
ctgcagactgctggggtggatttccatgcattttggaatatgcaggatgaacttgatacc
aggaatttagtttccaacgacatacacgctgtgctgaagacatatggagtagaggctgcc
aggacaaccatcataaacgaggtgaaagctgtatttgggtcctatggtatatctgtcaat
atccggcacctgatcctcattgctgatttcatgacccattctggtcgttaccgcccaatg
agcagacatggcatagccgattctgtatctcccctcagcaagatgacatatgagacagca
tcaaagttcattgttgaagctgcttatcatggggagacagacaacttggaggctccatct
gcaagaatctgcctagggctgcccgttaagatgggcactggcagttttgacttgatgcaa
aagctcgaagtgtag
DBGET
integrated database retrieval system
