KEGG   Macadamia integrifolia (macadamia nut): 122073171
Entry
122073171         CDS       T07436                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03020  RNA polymerase
ming03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122073171
  09124 Replication and repair
   03420 Nucleotide excision repair
    122073171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ming03021]
    122073171
   03400 DNA repair and recombination proteins [BR:ming03400]
    122073171
Transcription machinery [BR:ming03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122073171
DNA repair and recombination proteins [BR:ming03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122073171
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 122073171
NCBI-ProteinID: XP_042493643
LinkDB
Position
3:30888577..30892969
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRGLD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggtgaagaggaagaaaatgctgcagagctcaaaattggagatgaatttttgaag
gccaagtgtttaatgaactgtgaagtggcacttatccttgatcggaaatatgagcagctc
cagcagatgtctgatgatcctatgaatcaaatttctcaagtatttgagaagtcattgcag
tatgtgaagcgctttagccgctacaaaaatcctgatgctgttaggcaggttcgagaaatc
cttagcagataccagttggctgagtttgagctttgtgtacttggaaacctttgccctgaa
actgtggaggaagctatagccatggtgccatctattaagaccagaggacgggggctcgat
gacgaggcaattgaaaaaatgttaaatgacctctctttgataaagaaatttgagtag

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