Macadamia integrifolia (macadamia nut): 122089025
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Entry
122089025 CDS
T07436
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03020
RNA polymerase
ming03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122089025
09124 Replication and repair
03420 Nucleotide excision repair
122089025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122089025
03400 DNA repair and recombination proteins [BR:
ming03400
]
122089025
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122089025
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122089025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
122089025
NCBI-ProteinID:
XP_042514365
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All DBs
Position
9:complement(28589947..28615474)
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AA seq
321 aa
AA seq
DB search
MEGVSYQRFPKVKIRELKDDYLKFELRETDASMANALRRVMLAEVPTIAIDLVEIEGNSS
VLNDEFIAHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEFCSVEFHLHVRCDSDQTLDV
TSHDLVSSDPSVVPVDVVQRSDSVGYETSEQRGIIIVKLRRGQELRLRAIARKGIGKDHA
KWSPAATVTFMYEPDIHINEDLMETLSLDEKREWVESSPTKVFGLDPNTQQVVVIDPEAY
TYDEEVIKKAEAMRKPGLVEIYAKDDSFIFTVESTGAVKASQLFINAIEVLKQKLDAVRL
SEDTEEADDQFGELGAHMRGG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagtttcataccaacgattccccaaggtgaagataagggagttgaaggatgac
taccttaagtttgagcttcgggagacggatgctagcatggcaaatgcccttcgccgtgtg
atgctggcagaggttcccacaattgcaatcgacctggttgagattgagggcaactcatca
gtacttaatgatgagttcattgcccaccgacttggtctcatccctctaaccagtgaccgt
gccatgggcatgcggttctcccgtgattgtgatgcctgtgatggtgatggccaatgtgag
ttctgctctgttgagttccaccttcatgttcgctgtgactcagaccagacccttgatgtc
acgagccatgaccttgtgagttctgatccctctgttgtgcctgttgatgtcgtgcagcgc
tctgattctgttggatatgaaacttctgagcagaggggaataatcattgtgaagttgcgt
cggggtcaagaactaagattgagagcaatagctcgcaaagggattggcaaagatcatgct
aaatggtcgcctgctgcaaccgttacttttatgtatgaaccagatattcatatcaatgaa
gatttgatggaaacattgtcacttgatgagaaaagagagtgggttgaaagtagccctaca
aaagtttttggacttgatcctaatacgcaacaggttgtcgtgattgatcctgaggcatac
acgtatgatgaggaagtgatcaagaaagcagaagccatgaggaagccaggactggtagaa
atctatgccaaagacgacagtttcatttttacagttgaatctactggtgccgtcaaagct
tcacagttgttcatcaatgcgatagaagttcttaagcagaagctggatgcagttcgccta
tcagaggacacagaagaagctgatgatcagtttggtgaattgggtgcacacatgcgaggc
ggatga
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