Macadamia integrifolia (macadamia nut): 122090493
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Entry
122090493 CDS
T07436
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122090493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122090493
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122090493
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122090493
FA (Fanconi anemia) pathway
Downstream FA components
122090493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
CBP_BcsF
DUF6238
Motif
Other DBs
NCBI-GeneID:
122090493
NCBI-ProteinID:
XP_042516046
LinkDB
All DBs
Position
10:16464375..16496044
Genome browser
AA seq
1264 aa
AA seq
DB search
MDSTATKPNKPSGVYHIGGIPVEFPYKPYGTQLAFMGRVISTLDRAQSQGHCHALLESPT
GTGKSLSLLCSTLAWQQNQNTKNLSESKPAPEALSDPIAHGGGFIPEPEPSGNSIPGALQ
PSPSAMNSMSPKKKTPTIFYASRTHSQISQLIREYRKTSYRVKMAVLASKKHYCTNKHIC
GQENIDEKCKKLLKDPAGVGCFEFKNAHKVKAHPSLHSGGCHEAHDIEDLVKVGRAVNGC
SYYAARSMAEVAKLVFCPYSYVINPIIRRAMEVDLKGSILILDEAHNIEDMAREAGSVDV
EEDMLDVLQTELGQLCFADSTTYQPLHETIEGIISWIGQRKSTLQKHEFQHYCTCWTGEK
ALRELQEAGISKHCFPILKECAAKAIKAASNVESKEVSLTGMSAAVLEGLFSSFSYFFSG
NGLHILDYQLVLQRYASRDGEHGGNWKHSFSLWCLNPAVVFREIAGLSMSVILTSGTLSP
MDSFAAELGVQFETCIEAPHVIDVGTQLWAGAISTGPGNYPLNASYKTANCYAFQDALGA
TLEEICKIVPDGALVFFPSYHLMEKLCNRWRETGQWSRLNAQKPVFVEPRSQEDFALALK
GYHGSILRGNGPAPRKRRGKKRDLNQLDAKSTQNSSKGGAALLAVCRGKVAEGIDFSDEN
ARVVIIVGIPFPNVHDIKVAQKKKYNDTYHSSKNLLSGNKWYCYQAFRAMNQAAGRCIRH
MFDYGAILFIDERFREERNISHISKWIRKSIKQYDNFDMSIEGLQSFFRDAKERFGPKDM
NVLGTPKVKEEHMPCTKQKSLSKGAVHTHDHHDGQKVIYSSITTEKENQFSQSVMSMSKD
NLTLPQVKAQCGVEDEEFVPLVEKDLGSDKESIVFDCSSEKNLRWSETIPTASFNESREK
ILVNETSGVGENGTVGSPQDFPKAENSSITVFQASNELSDQLSFHSTSLASPSGAASRSK
CFLMDTPERNANMDICDRKSENESLNLSVNSHTQKWRRHISSPLVNLIQEKQFDIPNAKF
PNHVDCSGSVGSSRDAIRKIEFDFEVKDPKCKHQKLNLPQKFPVNNSVTLHASSSPVMDE
QLYICCSICQNPLGLSENHFLVTCSFVSSSKVYLASLLGSRGASPARNRSITVRVLISDI
SSVDQRLYNRLALEGAQKHGVWCEEDGCVFGTVFCPFCSSPDSCLGLQIMATDSSNIHLL
NKILFYPNRLEIKNPEESKDEKVLPSIEQFSYLPQQNSEGWRTTKAKLRLPKRGLPWSED
HFGA
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggattcgacggccactaaacctaacaaacctagcggcgtctaccacatcgggggaatt
ccggtggagttcccgtacaaaccctatggtactcagctggcattcatgggcagggtgatt
tcaaccctagatcgagctcagagtcaaggtcattgtcatgcattacttgaatcaccgact
gggactgggaaatctctgtcgctcctctgctctacgcttgcatggcagcagaaccaaaac
acgaagaatctttctgaatccaaaccagctcccgaggccttatctgatcccatcgcacat
ggtggtggatttattcctgaaccagaaccttccggtaattcaataccgggagctctacaa
ccatctccatctgcaatgaacagtatgagtccaaagaaaaagacacctaccatcttttat
gcctcgaggacacattcacaaattagtcaattgattcgggaataccgcaaaacatcatat
cgagttaaaatggcagttttggcatcaaagaaacactactgcaccaacaagcacatatgt
ggacaagaaaacattgatgagaaatgcaagaagcttctgaaggacccagcaggtgttgga
tgctttgaattcaaaaatgcgcataaagtcaaagctcacccatcacttcatagtggcggc
tgccatgaagctcatgatattgaagaccttgtgaaagttggacgagctgttaatggttgt
tcttactatgcagcacgttctatggcagaagtggcaaagctagttttttgtccttatagc
tatgtaattaatccaataattcggagagcaatggaagtagatcttaaaggatcaattctc
attcttgatgaagcccacaatatagaggacatggcacgtgaagctggtagtgtggatgtt
gaagaagatatgctggatgtgttgcagacagaattagggcaactgtgctttgctgattca
acaacttatcaacctctacatgagacaattgagggaattataagttggattggtcagagg
aaaagtaccttgcagaagcatgaatttcagcactattgcacttgttggactggtgagaag
gccttaagagagcttcaagaggctggtatatctaaacattgcttcccaatcttgaaagag
tgtgcagcgaaggcaatcaaagctgcatctaatgtggagtctaaggaagtttctttaact
ggcatgtccgcagcagtactggaagggcttttctcttcgttcagttattttttctctgga
aatgggcttcatatccttgattatcagctcgttttacaacgatatgcgtcgagagatggg
gaacatggtggaaactggaaacattctttcagtctatggtgtctgaatcctgcagtggtc
ttcagagaaattgcgggtctttcgatgtctgtgattcttacatcagggacattatctcca
atggactcatttgcggcggaacttggagtccagtttgaaacttgtattgaagctccacat
gtaatagatgttggaacacagctatgggctggtgccatttctactggtcctggaaactac
ccattgaatgcaagctacaaaacggccaactgttatgcttttcaggatgcacttggtgcc
actttagaagaaatctgtaagattgtgccagatggtgctcttgtcttcttccctagctat
catttgatggaaaagctatgcaaccgttggcgtgaaacaggacaatggtctaggttaaat
gcacaaaaacccgttttcgttgagccaaggagtcaggaagattttgcgcttgctttgaag
ggttatcatggttcaattcttcgaggtaatggacctgctcctaggaaacgcagggggaaa
aaacgtgaccttaaccagctcgatgcaaagtccactcagaattcttcaaaggggggtgct
gctttgcttgctgtgtgcagaggaaaggtcgcagaagggattgacttttcggatgagaat
gctcgagtggttataattgtcggcattccatttccaaacgtacatgatattaaagtggca
cagaaaaagaaatataatgacacttaccactcatccaaaaatcttctaagtgggaacaag
tggtattgctaccaagcatttcgtgctatgaaccaggctgcaggccgttgcattcgtcat
atgtttgactatggagccattctctttatagatgaacgatttagagaagagagaaatata
tcacacatttccaagtggataagaaagtccatcaaacagtatgacaattttgacatgtca
atagaaggattacagtcatttttccgtgatgcaaaggaaagatttgggccaaaagacatg
aatgtgttgggcactcctaaagttaaagaggaacatatgccatgtacaaagcagaagtct
ttaagcaaaggagctgttcacacgcatgatcatcatgatggacagaaagtaatttatagc
agtataacaactgaaaaggaaaatcagttctctcagtctgtgatgtctatgagcaaggat
aatctcactcttcctcaagtgaaagctcaatgtggtgttgaagatgaagaatttgttcca
ctggttgagaaggatttgggtagcgacaaagaatctattgtttttgattgcagttctgaa
aaaaacttgaggtggtcagagactatacccacagcatcctttaatgagagtcgagaaaaa
atcttagtcaatgaaacatctggtgtgggtgagaatggaactgttggtagtcctcaagat
tttcccaaggctgagaactcaagtataaccgtattccaggcttccaatgagttatcagac
caactttcgttccattcaacatccctagcgagtccaagtggagctgcctcgcgaagcaaa
tgttttcttatggatactcctgaaagaaatgctaatatggacatctgtgatcgaaaatca
gaaaatgaatctttgaatttgagtgtaaattctcatacccagaaatggaggaggcacatc
agttctccattagtaaacttaattcaagagaaacagtttgatattcccaatgccaagttt
cctaaccatgttgattgcagtggaagtgtgggatcatctcgagatgcgatccgcaaaatt
gaattcgattttgaggtgaaggaccctaaatgcaaacaccagaagctgaatcttccacaa
aagttcccagtgaataacagtgtcaccttacatgcatcttccagtcctgttatggatgag
caattatatatctgttgctcaatctgccaaaacccattgggattgtctgagaatcatttc
cttgttacttgctcatttgtttcgtcttcaaaagtttacttggcatccctccttggaagt
cgaggtgcatctccagccagaaatagatcaataactgtccgagttctaatctctgatatc
tcatctgtcgatcagcggctctataataggctcgctcttgaaggtgctcaaaagcatggt
gtatggtgtgaagaagatggttgtgtttttggtactgttttctgccccttctgttcctct
cctgacagttgccttggtttacagattatggcaactgattcatcaaatattcacttactt
aacaagatcttgttttaccctaatcgtttggaaatcaagaaccctgaagaatcaaaagat
gagaaggtgttgccttcaatagagcaattttcttatttaccacaacagaattcagaaggc
tggagaactacaaaagctaagctgagactacccaaaagaggtctgccttggtcagaggat
cactttggagcttaa
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integrated database retrieval system
