Micromonas commoda: MICPUN_104883
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Entry
MICPUN_104883 CDS
T02695
Symbol
GGPS1
Name
(RefSeq) geranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mis
Micromonas commoda
Pathway
mis00900
Terpenoid backbone biosynthesis
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
Module
mis_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MICPUN_104883 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mis01006
]
MICPUN_104883 (GGPS1)
Enzymes [BR:
mis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MICPUN_104883 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MICPUN_104883 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
MICPUN_104883 (GGPS1)
Prenyltransferases [BR:
mis01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MICPUN_104883 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8245279
NCBI-ProteinID:
XP_002503647
JGI:
MicpuN3_104883
UniProt:
C1EAR1
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All DBs
Position
7:888624..889673
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AA seq
349 aa
AA seq
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MQAVCLSTPAAIVRSSVRGRARSKSVVAPRRGGVPSVRAAAEAPAAAVEASELDFAAYIA
EKNAAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAMPTA
CALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETP
KSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAHKTGALLE
VSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAVGKA
TYPSLVGLEESKKIADKLIADAKDLLKDYDQEKAAPLIGLADYIKNRQN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggtctgcctttcaacccctgcggctatcgtccgctcctcggtgcggggcagg
gcgaggtccaagtccgtcgtggcaccccgccgcggcggcgttccctcggtccgcgcggcg
gccgaggcgcccgcggctgccgtcgaggcctctgagctcgacttcgcggcctacatcgcg
gagaagaacgcggccatcgagcaggccctctccgactccgtccccgagatgtatcccgag
cgcctgcacgagtccatgaggtactcgctgctcgcgggtggcaagcgcatccgcccctgc
ctctgcatcgccgcctgcgaactcatgggcgggaccatggatgtcgccatgcccaccgcg
tgcgcgctcgagatgattcacaccatgtccctcatccacgacgacctcccctccatggac
aacgacgacttccgccgaggcaagcccaccaaccacaaggtatatggcgaggagatggcc
atcctcgcgggcgacgcgctgctcagccacgcgttcgagtacatcggccgcgagactccc
aagtccgtgcccgccgaacgcaccctgcgggtcatcgtggacgtgggcaagtgcgtggga
tccgagggcctggtgggcggccaggttgtggacatcatgtccgagggcgccgaagccggc
gaggtcaccgtggagaccctccagtacatccacgcgcacaagaccggcgcgctcctggag
gtgtccgtcaccgccggcgccatcctcgccggcgcgaaggaggaggacgtcgagcgcctg
gggaagtacgcccagctcatcggcctggcgtttcaggttgtggacgacatcctggactgc
acgcaaacctcggagcagctcggcaagacggcgggcaaggacgaggcggtcggcaaggcc
acctatccgtccctcgtcggcctcgaggagtccaagaagatcgcggataagctcatcgcc
gacgcgaaggatctcctcaaggactacgaccaggagaaggcggcgcccctcattggcctc
gcggattacatcaagaaccgccaaaactga
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