Micromonas commoda: MICPUN_54933
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Entry
MICPUN_54933 CDS
T02695
Symbol
SGPL
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
mis
Micromonas commoda
Pathway
mis00600
Sphingolipid metabolism
mis01100
Metabolic pathways
Module
mis_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
MICPUN_54933 (SGPL)
Enzymes [BR:
mis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
MICPUN_54933 (SGPL)
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
8250023
NCBI-ProteinID:
XP_002507480
JGI:
MicpuN3_54933
UniProt:
C1FD78
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Position
1:complement(join(348902..350553,350644..350677))
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AA seq
561 aa
AA seq
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MVPDTRKLSYEFMFVVSNKMDAMMIIVDDFLHGTPPSRIVGGTVLVSYLGLKIISVGTDF
YCQLRNRGVLRVVFEAAKSLPILNQFVSREKAKLIAKLDKDLRKKIAANPLRVVELPIDG
LSSREILSEADFRRAKDTCQLMKSSQMSGAVYMADHEHCDLLCSIYSSFVHANPLHADAF
PSVTRMESEVVSMTASLLGGCSATNPGVCGLMTSGGTESILTAIRASRDYMRATRHIRRP
EMIVAVSAHAAVYKAAEYFNIQIVRVPVDKDFRMDVDATARAIRKNTILIYASAPGYPHG
TVDPVEKLGALAKKNGVCLHVDACLGGFVLPFIPSSKQSPLPMFDFRAPGVTSLSVDTHK
YGLSQKGSSVVLYASSLLRQYQYTAVMDWSGGLYISPSQPGSRSGGLIAQTWASLLHLGR
NGYKVMTEKICSASARLRAGISQIRGLQVLGSDVTMVVAWGSTDPLLDIYVVNDIMITKG
WHLSVLHTPAALHMCITPANLERVPELLSDLREAVDEAQNSNDEGISGGKAPIYGLAGAL
PDRDLVGDILKDVQDLMLKHV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtccccgatacgcggaaactttcatacgaattcatgttcgtcgtttcaaacaaaatg
gatgcgatgatgataattgttgacgatttcttacacggaacaccaccctcgcgcatagtc
ggtggaacggtcctcgtttcatatcttgggctgaaaatcatatcagttgggacagatttc
tactgtcagcttcgaaatcgtggcgtgctacgggtagtctttgaggccgctaagtcgcta
cccatcctcaatcagttcgtttcgcgcgaaaaagcgaagttgatagctaagctggataag
gatcttcgaaaaaagattgccgcaaatccacttcgagttgtagagcttccaatcgacgga
ttatcaagcagagaaatcttatcagaggctgattttcgccgagccaaggatacatgtcag
ctgatgaaatcgtctcagatgtctggagcagtgtacatggccgatcacgaacactgtgat
cttctgtgttccatatattctagttttgtgcatgccaatccgctgcacgccgacgcattc
ccatcagtgacgcggatggagtctgaagtagtcagtatgactgctagtcttcttggtggc
tgcagtgcaacgaatccaggcgtttgcgggctcatgacgtcgggaggtactgaaagtatt
ttaacagctatccgggcatcgagagactacatgcgggccactcgccatatacgtaggccc
gaaatgatagtggcagtttctgctcatgctgctgtctacaaggctgcggaatacttcaac
atccaaattgttagggttcccgtggacaaagacttccgcatggacgtcgatgcgactgcc
cgtgctattcgaaaaaatacaattttgatttacgcatctgccccagggtatccacacggt
acggtcgatccagtagagaagttgggtgcgctagcgaagaaaaatggagtctgtttacac
gttgatgcgtgtcttggaggatttgttcttcctttcataccctcctcgaagcaatcacct
ttgccgatgtttgattttcgcgcaccgggagtgacgtcactctctgtagatacgcacaaa
tacggtttatcacagaaagggtcttcagttgtgctatacgcgtcttctctccttcggcaa
taccaatacacagccgtgatggattggtccgggggtctatatatatcaccatctcagcca
ggttcgcgatctgggggtctgatagcgcaaacttgggcatcccttcttcatttgggaaga
aatggttataaggtcatgactgaaaaaatatgcagtgcatcagcccgtctacgagcagga
atttcacaaattcgtggactgcaggtgttaggttcagatgtgactatggtagttgcatgg
ggttcgacagatcctctgcttgacatatatgtggttaacgacatcatgatcacaaaaggt
tggcatctcagcgtccttcatactccagcagccttacacatgtgtattacaccggcaaat
ctggaacgtgtgcctgagcttttatctgaccttagggaagctgttgatgaagcacaaaac
tcaaacgacgaagggatatcaggcggcaaagccccgatatacggccttgctggtgctcta
cctgaccgcgacttggtgggtgatattctgaaggatgtgcaagacttgatgctcaagcat
gtctag
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