Micromonas commoda: MICPUN_58289
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Entry
MICPUN_58289 CDS
T02695
Name
(RefSeq) adenosylmethionine/pyridoxal dependant decarboxylase fusion protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mis
Micromonas commoda
Pathway
mis00330
Arginine and proline metabolism
mis00480
Glutathione metabolism
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
mis04148
Efferocytosis
Module
mis_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
MICPUN_58289
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MICPUN_58289
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MICPUN_58289
Enzymes [BR:
mis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
MICPUN_58289
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_decarbox
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
8243274
NCBI-ProteinID:
XP_002502359
JGI:
MicpuN3_58289
UniProt:
C1E5E7
LinkDB
All DBs
Position
5:complement(join(39709..42455,42594..42804,42936..43097))
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AA seq
1039 aa
AA seq
DB search
MSESIESDSSDNRYNFHSIDTNVEVETTWTPFEDVADLRPWGYVGNKRAPAIADRTDLTH
AFFHTNTNFFELAATSPAFDAPVAVASLNVTMNNTNDTNVLPCPHFEGVEKRIEIDFHAG
GLQRGLRSLPRDILDDAMTAAECLIVSKRTCAAFDAYVLSESSLFVYPTKVVLKTCGTTK
LLNAIPMFIEEAAKLGMQPRRAKYTRSTFMWPDEQPLEGNFDKEVEFLERHFGALGDGGN
AFVLGSKTKGVQWHVYLADDNSGAFVDGNGTEGSECSTGFETHSAPAARANLPDPTVSLE
VCMTDLDREHSKHFFRDDTYESCQKTTDNCGITDLFPQFDIDPYVFEPCGYSMNALSGSE
YATIHITPEDGFSYCSVERSNIPVSAADPEDYLRRVASTFKPGKFSFAVSTDAALPDAAN
IRRVPTLPGYRRIQASHQEVDASGGAVSFYTFERLPDVHVPVPTLPAVNLAAFKPGFEAG
HDSDRNTDSEEDAPDRKKFRPLVETPDITREVRPSSIVSSHVAESGFELNRCPSVNHMEA
PVHEHEPSTLSNHMTEYAGIATLRTPLPTSFPLARAFAGYDSEVINTLIGQHCKPLVGSG
GKTIDNFCLDIIENGLALPTTDRLARFCVVDLGVVMRRWRYWRATIPRAMPHYAVKCNPD
TGVLAILAALGSSFDCASATEVDMVMALGVTPDRIIYANPCKMPAHLARVRDCGVGLTTF
DSVAELHKIYELAPEMKVVLRLRADDPDARCVLGNKFGAEPPEIEPLLTAAKHLGIHVEG
VAFHVGSGATNPRAFRVALERARLAFDIAERVGLPPLKLVDIGGGFSGSVRTVAATNDSD
VTLTEVAKTVNAALEEFFPESSGVRIISEPGRYFAEATTTLATMVFSRRIRSEEDGSVAK
GGDTHQYFVSDGLYGMMNCLLYDHASITARILPVSTNAAALAGGDLNGIVPRGVYSNEED
TNGLTKYPSTVFGPTCDGIDKVLENTLLPEVSIGDWLLFPHMGAYTVSAGSNFNGFDCAG
VRKYYVASIVDGDPDEIRR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtctattgagagcgacagtagcgacaatcgttacaatttccattccatcgac
accaacgtcgaagtagagaccacctggacgccctttgaggacgttgccgatctccgtccc
tggggatacgtaggaaacaagagagcacccgccatcgcagacagaacggatttgactcac
gcgtttttccacacgaacaccaactttttcgagcttgccgccacgtcgccggcctttgac
gctccagtagccgtggcttcactgaacgtgaccatgaacaacaccaacgataccaacgtg
cttccctgccctcatttcgagggcgttgagaagcgcatcgagatcgacttccacgccgga
gggttgcagcgcggcctgcgctcccttcctcgcgacatcctcgacgatgccatgaccgcc
gccgagtgcctcatcgtctccaagaggacctgcgccgcctttgacgcgtacgtcctctcc
gagtcgtcgctctttgtctacccgaccaaggtggtcctcaagacgtgcggcaccaccaag
ctcctgaacgccatccccatgttcatcgaggaggcggccaagctcgggatgcagcccagg
cgcgccaagtacacccgctccaccttcatgtggcccgacgagcagccgctcgagggtaac
tttgacaaggaggttgagtttctcgagcggcactttggcgcgcttggcgacggcggcaac
gcctttgtcctcggctccaagaccaagggcgtccagtggcacgtgtacctcgcggacgac
aactccggtgcttttgtcgacggcaacggcaccgagggcagcgagtgctccaccggcttt
gagacgcactccgccccggcggctcgcgccaacctgccggatcccaccgtgtccctcgag
gtgtgcatgacggacctcgaccgcgagcactctaagcacttcttccgcgacgacacctac
gagtcttgccagaagaccaccgataactgcggcatcacggacctgttcccccagtttgac
atcgacccctacgtctttgagccctgcggctactccatgaacgccctctctggctcggag
tacgccaccatccacatcacccccgaggatggcttctcctactgctccgtggagaggtcc
aacatccccgtgtccgcggctgaccccgaggactacctcaggcgcgttgcgtccaccttc
aagcccggcaagttttcctttgccgtctccaccgacgccgcgctcccggacgccgcaaac
atccgccgcgtcccgaccctcccgggctaccgccgcatccaggcgtcccaccaggaggtt
gacgcctcgggcggagcggtgtccttctacacctttgaacgtctccccgatgttcacgtg
cccgtgcccaccctgccggcggtgaacttggcggcgttcaagcccggctttgaggctggc
cacgactcggacaggaacaccgactcggaagaggatgcgccggatcgcaagaagttcagg
cccttggtcgagacccccgatatcacccgggaggtcagaccctcgtccatcgtgtcctcg
cacgtcgcggagtctggttttgaactgaacaggtgccccagcgtgaaccacatggaggcg
cccgtgcacgagcacgagccctctacgctcagcaaccacatgactgagtatgcgggcatc
gccacgctgaggactccgctccccacctcgtttcccctcgccagggcgttcgcggggtac
gactctgaggttatcaacaccctcatcggtcagcactgcaagcccctcgtcggctcgggc
ggcaagaccatcgacaacttctgcctcgacatcatcgagaacggtctcgcgcttcccacc
actgatcgcctcgcgcgcttctgcgtcgtcgacctcggcgtcgtgatgcgccgctggcgc
tactggcgcgcgaccatccccagggctatgccgcactacgccgtcaagtgcaaccccgac
accggggtgctcgccatcctcgcggcgctcggatcttcctttgactgcgcctctgccacc
gaggttgacatggtgatggcgctcggcgtcacccccgaccgcatcatctacgccaacccg
tgcaagatgcccgcgcacctcgcgagggtgcgcgactgcggcgtgggcctgaccaccttc
gactcggtcgccgagctccacaagatttacgagctcgcccccgagatgaaggttgtcctc
cgcctccgcgcggatgacccggatgccaggtgcgtcctcggcaacaagtttggcgccgag
ccacccgagattgagcccctgctcaccgcggcgaagcacctcggcattcacgtcgagggt
gtcgccttccacgtgggatccggtgccaccaacccccgcgcgttccgagtggctctggag
agggctcgcctcgccttcgacatcgccgagcgcgtcggcctgccccctctcaagctcgtc
gacatcggcggcggcttctccggctccgtcaggactgtggcggccaccaacgactccgat
gtgaccctcaccgaggttgccaagacggtcaacgcggccctggaggagttcttccccgag
tcctccggcgtccgcatcatctcggagcccggcaggtactttgccgaggccaccaccacc
ctggccacgatggtcttctcccgtcgcatccgctccgaggaggacggctctgtggccaag
ggcggagacacccaccagtacttcgtgtctgatggtctctacggcatgatgaactgcctc
ctctacgaccacgcctccatcaccgctcgcatcctccccgtgtccaccaacgcggcggcg
ctcgccggcggtgacctcaacggcatcgttccccgcggcgtctactccaatgaggaagac
accaacggcctcaccaagtacccatccaccgtctttggtcccacctgcgacggcatcgac
aaggtgctcgagaacaccctgctccccgaggtgagcattggcgactggctcctcttcccc
cacatgggcgcctacaccgtctccgccggatccaactttaacggattcgactgcgccggc
gtgcgcaagtactacgttgcctctatcgtcgacggcgaccccgatgaaattcgccgctag
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