Micromonas commoda: MICPUN_58883
Help
Entry
MICPUN_58883 CDS
T02695
Name
(RefSeq) isochorismate synthase
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
mis
Micromonas commoda
Pathway
mis00130
Ubiquinone and other terpenoid-quinone biosynthesis
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
mis01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
MICPUN_58883
Enzymes [BR:
mis01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
MICPUN_58883
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
MICPUN_58883
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
MICPUN_58883
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
MICPUN_58883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chorismate_bind
MR_MLE_C
Abhydrolase_6
TPP_enzyme_N
Abhydrolase_1
TPP_enzyme_M_2
MenC_N
TPP_enzyme_C
Thioesterase
Hydrolase_4
TPP_enzyme_M
Motif
Other DBs
NCBI-GeneID:
8243574
NCBI-ProteinID:
XP_002502659
JGI:
MicpuN3_58883
UniProt:
C1E747
LinkDB
All DBs
Position
5:complement(1252273..1259643)
Genome browser
AA seq
2456 aa
AA seq
DB search
MSAAGLRASLAPRASAASGGRAGDGRARRAAKARPAPRRRDRSPIRDADAATRTTAPAVS
ADAVQVVAPTTLEDRSSDPAIGDASAPARPPVETCQHVHLGSASSIAEALARVRAGLRGL
TQDASGHDGASGGGSMPPFASGVVRLTVAVPRTVDALEWLRSLPDDDDLNDDGEGGDDVK
AALLPRYYLSPRTPPPAIRSGEGDDGGDENRHRQGVHDRGKGSGPMNDDGGADGGADGGA
DGSRTRRRPQAEPPEWRADPRGAAAAAGAACVWTGPSAFGADVLADQRRFLDTGEPHDTA
PRVYGAGRFDADSDCAVGDEWASFGGHYFFLPTLEVVEGARCATVACCVAWDAAGGAACR
DGFAAAVAAAVTAVDAASRPVARSRGGARSQQSPSSPSPSSSSGLTRSTRERRLPPGASD
VTGRVLEPDQEGWVRTVDGLLRALREGEEAARGGRAGSDADGDGDEDDGVNESFQSSPPR
VWDEKDAYGDDRYMENFAAQSNWKEVLGEVGDGDERGTNGGTTDGADRSLRDRLLELGRS
AGVEAPPASVLEDLEAFAMAAGIGGASDVLTGSANGRRRGKTGRNGNPRNADVGAIGMGW
SVDESVDENEAVADVEAIADAVAAVPSNANTDGTDLAPLRKVVLARRTKLTLGSPVNPLA
LVAALKARDPDAYQFALIHADGAAFVGSTPERLFSARDGHAASEAVAGTRPRGSDEGEDA
ALAYEMLLSPKEHEEFAIVREEVRRALGTVAEGGPGGVKAELEKGVLRHFSVQHLYARLG
AALAPGKSEADVLNALHPTPAVCGFPRRAALDAIRVAEPFDRGLYAGPIGWVGVDSAEFA
VAIRSALVSPAGDDISLYAGVGVVAAADPAAEWRELNLKTRPLEALLAKRPTLADAPNAN
QAWADLIVGELVRGGVGVFCVAPGSRSTPLTLAAERHPTARVVVCIDERSLGFYALGYGK
GSGKAAAVITSSGTAVANLLPAAVEAHESCAPLLLLTADRPPELRDTSANQTIDQVKIFG
SYARFGVDLAPPGDGSPARVAATAVATAVRHLHGPRPGPVHVNCQFRDPLGPSGAEWDVR
RDLRGFDGWERTSAPFTSGAPHASSSSSSEDLSELAALIRSARKGLLVVAGGGDASDALA
AAELARTLGWAVVADAASGLRVKGGASSSLKSSLRSSSRSSSSSSHDLEWSAASAECPGL
VNTLDLMLVSDEIRDYVGETDVILQLNPRVTSKRVQQMLESAAMERGAAWACVAASERRA
DPGHCVSLHVACDVPRVAEGLARLLDDVDSDSADGRYGGRYCASENARSCARFKETLLAC
DAAASREACAALGDIEAAEGISEMAVALAVTENLPPSAGLFIGNSMPIRDVDMLSGIRRR
VGTDAGRHPIGANTSSRSLGSGAGPGAPVCANRGASGIDGVVSSAAGYAAGLGRPVTLLI
GDVSFQHDANGLLLLRERPGQPPVTVVVVNNGGGGIFSFLPVADQIDSGSFTKLFATPPD
VSRRGLCDAHRVAHSHPSTPEALKRALDAAWSEGRHSVVEVTTSRARNLEQHRALQARVA
RAAACALDLRTRAALASASSSGMPRVASASVRGFELPMLKKPTTTEGEAKETAGTRRGHL
LRVQLDDGRVGWGEASPLPGLHAESTEDAGAQLRAMAALLDGGDGGGGVLAPPELPLLGG
AVSEWLRGVVGVVDPDASLLPSVRFAVESAVLSALASPGAPLADVLLFGSVQRRGASKKT
NEGGEGGESVDPTDDPTSHQSVEINALIEAGLAPSAAAAEALRLVRLGHGCVKLKVARGE
GSAGAMEDAARLRAIRTAVGPDVALRADANRRWSLNDALSFGLQCAELDLEYVEEPVADP
ANNLAAFHCTTGVPVALDETVDECAVAAKAAGTDIERALAEYFEPTFGVAALVLKPSVLG
GLEATAACAAAARSRGVNVVVTTSFESGVGVATCANLAAAMDAAAVDAAAAARAEDDARA
RAERIGIEANDGDDVSLPFRASREARMRLMNSIDRGTFELGDGEVAGSIPGGNGNGGGSF
GWEDESHRSPVASLRAMRHGLGTGAWLDGDAVTPPAAPLASLPGGGVGVDLGRLPRDLVV
SNETASAAAASAAAKVGSSYAGWGVESRHEVETSHGKYSFRVLDSGNAPPFTPDSDSALA
PPPVVFLHGFMGGAEDWNAIASAVAPERRCVAVDLPCHGRSRFVPSSERANDEGLSVEAV
AEAVAVLITERVCPAGAKGAVLVGYSMGARVALRAATSHPGCAAAVAAIGGSGGIRGDVQ
RNMRADRDDAMAAALAKGGLAAFAGAWYRQGLFRALASHPRWRDGAIARRRCKIPNFESS
DGDEEDEDEDEDGVARDLARVLASMSPGRQAVVTGDDLAGIHRGAVGGLTLLAGDLDAKF
IATAYAMAADANAVLERDEDGGDGVEVVTVPGAGHAVHLEAPEGLVLPILRVVRRT
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcgggattgcgcgcgtccctcgcgccccgcgcgtccgccgcatccggcggt
cgggcgggcgatggacgagcgcgacgcgccgccaaggccaggcccgcgcccaggcgccgc
gaccgctcgcccatccgcgacgccgacgccgcgacgaggacgaccgccccggccgtctcc
gccgacgcggtgcaagtcgtcgcgccgacgacgctcgaggatcgctcctcggatcccgcg
atcggcgacgcgtccgcgcccgcgcgcccacccgtggagacgtgccagcacgtccacctc
ggctcggcgtcgtccatcgccgaggcgctcgcgcgcgtccgcgcgggcctccggggtctc
acgcaggatgcgtcgggccacgacggcgcgtcgggcggcgggtccatgccgccgttcgcc
agcggcgtcgtccgcctcaccgtcgccgtgccgcgcacggtggatgcgctcgagtggctc
agatccttacccgacgacgacgatcttaacgacgacggcgaaggaggcgacgacgttaaa
gccgcgctgctgcccaggtactacctcagccctcggacgccgcccccggcgatccgatcg
ggcgagggcgacgacggcggcgacgaaaaccgccaccggcagggcgtccacgacaggggc
aagggttcgggtccgatgaacgacgacgggggtgccgacgggggtgccgacgggggtgcc
gacgggtcgcgaacgaggaggaggccgcaggcggagccgcccgagtggcgcgccgacccc
cgcggcgccgccgccgccgccggcgccgcgtgcgtctggaccggtccgtcagcgttcggc
gcggacgtcctcgcggaccagcgcaggttcctcgacaccggcgagccgcacgacaccgcc
ccgcgcgtgtacggcgccggaaggttcgacgcggattcggattgtgccgtaggcgacgag
tgggcttcgttcggcgggcattactttttcttgccgacgctggaagtggtggagggcgcg
aggtgcgcgacggtggcgtgttgcgtggcgtgggacgccgcgggcggggcggcgtgccga
gacgggttcgcggcggcggtcgcggcggcggtgaccgcggtggacgcggcgtcgcgaccc
gtcgcgcgctcgcgcggcggggcccgctcgcagcaatcgccgtcatccccatccccgtcc
tcgtcgtcgggattgacgcgatcgacgcgagaaagaaggctgccgccgggcgcgtctgac
gtcaccggaagggttctggaacccgaccaggagggttgggtgcgcaccgtggacgggctc
ctgcgcgcgctgagggagggcgaggaggctgcgcggggaggccgcgccggctcggacgcc
gacggggatggggatgaggatgacggggttaacgaaagtttccaatcttcgccgccgagg
gtttgggacgagaaggacgcgtacggcgacgaccggtacatggagaacttcgcggcgcag
agcaactggaaagaggtgctcggggaggttggcgacggcgatgaacgcgggacgaacggc
gggacgaccgacggcgccgatcggagccttcgcgatcgtctcctcgagctcggtcgatcc
gccggcgtggaggcgccgccggcgtcggtgctggaggacctggaggctttcgcgatggcc
gcgggcatcgggggcgcgagcgacgttctaacgggaagcgcgaacggacggcggcggggg
aagacggggaggaacgggaacccgcggaacgccgacgtcggcgccatcggcatgggatgg
tccgtcgacgaatccgtcgacgagaacgaagccgtcgccgacgtcgaagccatcgccgac
gccgtcgcggcggtgccgtcaaacgcaaacacagacggcaccgacctcgcgcctcttcgc
aaggtggtcctcgcgcgacgcaccaagctcactttgggatcccccgtgaaccccctcgcg
ctcgtcgcggcgctaaaggccagggacccggacgcgtaccagtttgcgttgattcacgcc
gacggagccgcgttcgtcggatccacccccgagcggctgttcagcgccagggacgggcac
gcggcgtcggaggctgtggccggaacaaggccgaggggttccgacgagggcgaggacgcc
gcgctcgcgtacgagatgctgctctcgcccaaggagcacgaggaattcgcaatcgtccgt
gaagaagttcgcagggcgctcggcacggtggcggagggcggccccggcggggtcaaggcg
gagctggagaagggcgtcctccgccacttctccgtgcagcacctctacgcccgtttgggc
gccgcgttggcgcctggaaagagcgaggcggacgtgttgaacgcgttacatccgacgccc
gcggtgtgcggcttcccgaggcgagcggcgctcgacgcgattcgagtagccgaacccttc
gaccggggtttatacgccgggcctatcggttgggtcggcgtcgactcggcggagtttgcc
gtcgccattcgcagcgcgctggtgtcccccgccggcgacgacatctcgctgtacgcgggg
gtcggggtggtggcggcggcggatcccgccgcggagtggcgcgagctcaacctcaagact
cggccgctcgaggcgctcctcgccaagcggccgacgctggctgacgctccgaacgctaac
caggcctgggcggacctcatcgtcggcgagctggtcaggggcggcgtcggcgtcttctgc
gtggctcccggatcgaggagcacgccgctgacgctcgccgcggagaggcatcccacggcg
agggtcgtcgtgtgcatcgacgaacggtcgctcggtttttacgcgttgggctacgggaaa
gggtccggcaaggccgcggcggtgatcacgtcctcggggacggccgtcgcgaacctgcta
cccgcggcggtggaggcgcacgagtcgtgcgcgccgctgctgctgctcaccgcggatagg
ccgccggagctgcgcgacaccagcgccaaccaaaccatcgaccaggtgaaaatattcggt
tcctacgcgaggttcggggtggacctggcgccccccggggacggctcacccgcgcgcgtc
gcggcgacggccgtcgccaccgccgtgcgacacctgcacggcccgcgacctgggccggtg
cacgtcaactgccagttcagagacccgctcggaccgtccggggcggagtgggacgttcgc
cgcgacttgcggggttttgacgggtgggagcgaacctcggcgccgttcacctcgggcgcc
ccccacgcctcgtcctcatcctcgtcggaggacttgagcgagctcgcggcgttgatcagg
tcggctcggaagggtttgctcgtggtggctgggggaggagacgcgtcagacgccctcgcc
gcggctgagctggcgaggacgctcgggtgggcggtcgtcgccgacgccgcctccggcctg
cgcgtcaagggcggcgcgtcgtcgtcgttaaaatcgtcgttaagatcgtcgtcaagatcg
tcgtcgtcgtcgtcgcacgacctcgagtggtccgcggcgtcggcggagtgtcccgggctg
gtgaacacgctcgacctgatgctcgtctcggatgagattcgggactacgtcggcgagacc
gacgtcatcctgcagttgaacccgcgggtgacgagcaagcgcgtgcagcagatgctcgag
tccgccgcgatggagcgcggggcggcgtgggcgtgcgtcgccgccagcgagaggcgggca
gaccccgggcactgcgtgtcgcttcacgtcgcgtgcgacgtgccgcgagtcgcggagggc
ctcgcgaggctcctggacgacgtcgattctgattccgcggatgggcgttacggcgggcgt
tactgtgcctccgagaacgcgaggtcgtgcgcgaggttcaaggagacgctgctggcgtgc
gatgccgcggcgagtcgcgaggcgtgcgcggcgctcggggacatcgaagccgcggaggga
atctcggagatggcggtggcgctcgccgtcaccgaaaacctacccccgagcgcgggtctg
ttcatcggcaactcgatgcccatacgcgacgtggacatgctctccgggattcggaggcgg
gtgggtaccgacgccgggcggcaccctataggggcgaatacctcgagtaggtcgttgggt
tccggagccgggcccggggctcccgtgtgcgccaacaggggcgcgagcggcatcgacggc
gtcgtatcatccgccgccggttacgccgcggggctcggtcgtccggtgacgctgctcatc
ggggacgtgtctttccagcacgacgccaacgggctgctgctgctgagggagcgacccggt
cagccgcccgtgacggttgtggtggtgaacaacggcggcggcggcatcttttcgttttta
ccggtggcggaccagatcgactcgggttcgttcacgaaactcttcgcgacgcctccggac
gtttccagacgcgggctatgcgacgcgcacagggtcgcgcactcgcacccgagcaccccc
gaggcgctgaagagggcgttggacgcggcttggtccgaagggaggcacagcgtcgtcgag
gtgaccacgtctcgagctcgaaacttggagcagcaccgcgcgctgcaggctcgcgtggcg
cgcgcggcggcgtgcgcgctcgacctgcgcacgcgcgcggcgttagcgtcggcgtcgtcg
agcggtatgccccgcgtcgcgtccgcgtccgtgcgcgggttcgagctccccatgctcaaa
aagccgacgacgaccgagggcgaggctaaggagacggcggggacgcgacgcggacacctg
ctcagggtccagctcgacgacggcagggtgggctggggcgaggcgtccccgcttccgggg
ttgcacgcggagtccaccgaggacgccggcgcgcagctgcgcgcgatggcggcgcttctc
gacggcggcgacggcggcgggggagtgctcgcgccgcccgagcttcccctgctcggcggc
gccgtctccgagtggctccggggcgtcgtcggcgtcgttgaccccgacgcgtcgctgctt
ccgtccgtgcgtttcgcggtcgagtccgcggtgctctccgcgctcgcatcgccgggcgcg
ccactcgcggatgtgctcctgttcggttccgttcaaagacgaggagcttcaaaaaagaca
aacgagggaggcgagggtggcgagtccgtggatccgaccgatgatccgacgagtcatcag
tccgtggagatcaacgcgctcatcgaggctgggctcgcgccgagcgccgccgccgccgag
gctctccggctcgtccgcctcgggcacggatgcgtcaagctcaaagtcgccaggggagag
ggatccgcgggggcgatggaggacgccgccaggcttcgcgccatccgaaccgccgtcggc
cccgacgtcgccctccgcgccgacgccaacaggcggtggtccctcaacgacgccctctcg
ttcgggcttcagtgcgcggaattggacctggagtacgtcgaggagccggtcgcggacccc
gcgaataacctcgccgcgtttcactgcaccacgggggtacccgtggcgctcgacgagacc
gtggacgagtgcgcggttgccgcgaaagcggcgggcaccgacatcgaacgggcgctggcg
gagtacttcgagcccacgttcggggtggcggcgttggtgctcaagccctccgtgttgggc
gggttggaggccaccgccgcgtgcgcggcggcggcgagatctcgcggcgtcaacgtcgtc
gtcacgacgtcttttgaatccggcgtgggcgtggcgacgtgcgcgaacctcgcggcggcg
atggacgcggcggcggtggacgcggcggcggcggcgagggcggaggacgacgcgagggcg
cgagccgagcggatcggtatcgaagcgaacgacggcgacgacgttagcctcccgtttcga
gcgtctcgcgaggctcgcatgcgtctgatgaactccatcgaccggggaaccttcgagctc
ggtgatggggaggtcgcgggttcgatacccggcgggaacgggaacggtgggggttcgttc
ggctgggaggacgagtcgcatcggtcgcccgtcgcgagccttcgcgcgatgcgccacggg
ttgggcaccggcgcttggctcgacggcgacgcggtgactccacccgcggcgcccctcgcg
tcccttcccggcggcggcgtgggcgtggacctgggacgtctcccgcgcgatctcgtcgtt
tcgaacgagacggcgtcggcggcggcggcgtcggcggcggcaaaggtgggttcctcctac
gccgggtggggcgtcgagtcgcggcacgaggtggagacgtcccatggaaagtactcgttc
agggtgctggacagcgggaacgcgccgccgttcacgccagattccgattccgcgctcgcg
cccccgcccgtggtgttcctccacgggttcatgggcggcgcggaggactggaacgcgatc
gcgtcggcggtggcgccagagcggaggtgcgtagccgtggacctgccgtgtcacggacgt
tcgcgattcgttccctcttccgagagggcaaacgacgagggcctgagcgtcgaagccgtc
gccgaggctgtcgcggtgctcatcaccgagcgcgtgtgccccgccggcgcgaagggcgcg
gtgctggtcggctactccatgggagcgagggtggcgctgagggcggcgacgagccacccg
gggtgcgccgccgccgtcgcggccatcggcggctccggggggatccgcggcgacgttcag
cgaaacatgcgagccgatcgcgacgacgcgatggcggcggcgctcgcgaagggtggcctc
gcagcgttcgcgggcgcgtggtaccgccagggcctgttccgcgcgctcgcgtcgcacccg
aggtggagggacggcgccatcgcgaggcgccgatgtaaaatcccgaatttcgagtcgagc
gacggggacgaagaggacgaggacgaggacgaggacggcgtcgcgagggatctggcgcgc
gtgctcgcctcgatgagcccggggaggcaggcggtggtgaccggcgatgacctcgcgggg
atccaccgcggggccgtcggaggtttgacgcttctggcgggtgacctcgacgcaaagttc
atcgcgacggcgtacgcgatggccgcggatgcgaatgcggttttggaacgggacgaagac
ggcggggacggggtcgaggtggtgacggtgcccggggcggggcacgcggtgcacctggag
gcgccggagggtttggtgcttcccatccttcgcgtcgtgaggaggacgtag
DBGET
integrated database retrieval system