KEGG   Methanocaldococcus jannaschii: MJ_0171
Entry
MJ_0171           CDS       T00003                                 
Name
(GenBank) DNA ligase (lig)
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mja  Methanocaldococcus jannaschii
Pathway
mja03030  DNA replication
mja03410  Base excision repair
mja03420  Nucleotide excision repair
mja03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MJ_0171
   03410 Base excision repair
    MJ_0171
   03420 Nucleotide excision repair
    MJ_0171
   03430 Mismatch repair
    MJ_0171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mja03032]
    MJ_0171
   03400 DNA repair and recombination proteins [BR:mja03400]
    MJ_0171
Enzymes [BR:mja01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MJ_0171
    6.5.1.6  DNA ligase (ATP or NAD+)
     MJ_0171
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MJ_0171
DNA replication proteins [BR:mja03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MJ_0171
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MJ_0171
DNA repair and recombination proteins [BR:mja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MJ_0171
   NER (nucleotide excision repair)
    Other NER factors
     MJ_0171
   MMR (mismatch excision repair)
    Other MMR factors
     MJ_0171
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase DUF2071
Other DBs
NCBI-ProteinID: AAB98156
UniProt: Q57635
LinkDB
Position
complement(173302..175023)
AA seq 573 aa
MLWRDVCEIFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYDER
ELGIGEKLLINAVTSIGIKKDELLEKIKETGDIGLAIEQLKSKIKQASLFFQPLTVDEVY
ETLKRVGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDALSV
YFNVPKEKLEKIYAITNDIGLLAEKLLMGDLESEELKLKLFRPIKPMLAQLTPSIEEALL
EMGRAQFETKYDGARVQIHKDGNKVKIYSRRLEDVTNALPEIVEAVKNINVDKLIVEGEC
VAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDILYKDGVSFIDEEFEKRRK
VLEEIVGYENDWRTERKRIEKELKSDKIIDISYKLVTNDAKEAREFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLESLDVVITKAKRGMGKRKDWYGSFEICVRDEEGNLYP
IGHVGTGLTEADLEFLKEEIDKIIIRDLGEEVEVEPKIVIEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGVNEINTIEDVERIYEIQRGRK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgctttggagagatgtttgtgaaatatttaataaaattgaaaaaacaacaaaaaggttg
gaaaagagagattattttataaaattaattgacatggttaaagagaaagggaagccagag
gatttaaaaaagatttgttatatggctatagggagggtttatcccgaatacgatgagaga
gagttaggaattggagaaaaacttttaataaatgctgttacatctataggaattaagaaa
gatgaattgttagagaaaattaaagagacgggagatattggattggcaatagagcaatta
aaatcaaagattaagcaagcatctttattttttcagccattaactgtagatgaggtttat
gaaaccttaaagagggttggggagatagagggagaaggttctcaaaagaaaaagttgagg
ttaataagtagtctctttttaagagcttcaccaatagagtgcaggtatttggcaaggtta
attttggaagatatgaggatagggatgaatgttccaactatattagatgctttgtcagtt
tatttcaatgttccaaaggaaaaacttgagaagatatatgctataaccaatgatattggg
cttttagctgagaaattattaatgggagatttagaaagtgaggagctaaaattaaaatta
tttagaccaataaaaccaatgttggctcaattaactccttcaattgaagaggcattattg
gagatgggcagagctcaatttgaaacaaagtatgatggagcaagagttcaaatacataag
gatggaaataaagttaagatatatagcaggagattggaggatgttacaaatgcccttcca
gagattgttgaggcggtaaaaaatattaatgtagataaattaattgttgaaggggagtgt
gtagctatagataaacaaacaggaaagccaagacctttccaagatatacttagaagattt
aggagaaagtatgatattggaaagatgatgaaggaaataaatttgagagtttatttgttt
gatattctttataaagatggagtatcatttatagatgaggaatttgaaaagagaagaaaa
gttttagaggaaattgttggttatgagaatgattggagaactgaaagaaagaggatagag
aaagagcttaaatcagataaaataattgatatatcctataaattagtcacaaacgatgca
aaagaggcaagagaattttataactggtctctatctattgggcatgagggagttatgatt
aaaaatttaaaggctccttataccccaggaagtagagttagaacaatgtataaatttaaa
ccaactcttgagagtttagatgtcgtaattacaaaggcaaagagagggatggggaagaga
aaggattggtatggttcatttgaaatatgtgttagagatgaggaagggaacctctaccct
attggacatgtagggactggactaactgaggcagatttagagtttttgaaagaagagatt
gataaaattattattagagatttaggtgaagaggttgaagtagaaccaaagatagttatt
gaagttgcttatgaagaaattcaaaaatctgataaatatccttgtggctatgctttgaga
ttcccaagggttgtaagatttagatttgataagggagttaatgagataaacactatagag
gatgttgaaaggatatatgaaatccaaagaggaaggaaataa

DBGET integrated database retrieval system