Maniola jurtina (meadow brown): 123872786
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Entry
123872786 CDS
T09254
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123872786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123872786
Enzymes [BR:
mju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123872786
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123872786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Nop14
Peptidase_A21
ATP-synt_ab_C
Motif
Other DBs
NCBI-GeneID:
123872786
NCBI-ProteinID:
XP_045773267
EnsemblRapid:
ENSMJUG00000005487
LinkDB
All DBs
Position
15:complement(11805292..11811325)
Genome browser
AA seq
1658 aa
AA seq
DB search
MDVSSRFSSALTGLTSVDPDSVQFLMFSEQDMRKLSVTKITNTISFDSMGNPTKGGLYDP
LLGPLRDRNDFCATCSNALLHCPGHFGHIELPLMCVNPLFIKNIYSLFRISCLKCFKVQM
DDRMKTILKLQLELLDAGHVTAALDLEMFVGDVKGDHKSETSPEKPNKFIRKCQKLFKKR
DCLNDRFQNKNTDRLRTKIISQYFKTINTSKNCLYCRSKLIKVTISDNKIMYNMAAETGV
PGKGIKILMPDDIKHYCEKIEQNDEDILTHCIPVLRFANCKPVTGIFFMHMIPVLPSNVR
PCNVLQGELVEHTQTKVYKFILAATYSARAVLQVLSAPDQQKAIDGLDQRPRQAYEGVMG
KSPSEKLHTIWQDLQKQINQVLSCEGQGIDSQGLKQILEKKTGVIRMYMMGKRVNFAARS
VITPDPNVDIDEIGIPDVFATKLTYPTPVTEWNVDELRKMVINGPNKHPGAERLEVNNGR
IIRIPPDSLQKRKSLAKKLLTPDEFKNSGLKIVHRHLVNGDVLILNRQPSLHKPSMMAHR
ARILKGEKTIRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVTKQYLVPKDGT
PLSGLIQDHVISGVRMSLRGTFFSKADYHQLVFQALSKHKGEIKLLPPTILKPITLWSGK
QVLSTIIMNTTPKGKPYLSLDGKAKINAKAWQKEPPRAWEGGGEVFSNPDTMTEAEVIIR
KGELLCGVLDKTHYGATPYGLVHCMYELYGGDSSSALLSSFSKVFTFYLQWLGFTLGVKD
ILVVEEANKKREEIISLVRQAGRVAAIKATEVPVDIDDNKLKDTIGEMLIKDQKFRANLD
RQYKNMLDSYTNDINTTCLSKGLLEKFPSNNLQLMVQSGAKGSTVNTMQISCLLGQIELE
GKRPPIMISGRSLPSFPPYDVSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKT
SRSGYLQRCLIKHLEGLSVGYDHTVRDADSSVIQFAYGEDGLDVLKCQFLKQKQFRFLDV
NSNALIAKSVLKKLKEDVDPKEITKAQKSLKKWKKKNGSPFAKVRTSGFSQFSTLAKKDI
VLDDMPTDQTRDPMYWELEKLWRSLDEEERQQYVKKRCPDPIPCKNSPEFKFGTINEQLD
GFVQDYLKNRQESTYSEFTEKEKFVEVMNAKYLASLAEPGEPVGLLAAQSIGEPSTQMTL
NTFHFAGRGDMNVTLGIPRLREILMTASAKLKTPNMDIPFHPNIPDLTRKAEKLRQKMNR
VTVADVLEKIDVQCQIVTEPNRQLKTTMRFAFLPHSQYKTQYAVKPPQVIKHMQNKFFSE
MFAVIRKQAKATSGILWASEKDNKKRRAMSDDEEDEEVTPEAREPAADADSSDEEAPNDD
DDNTDVKIRKKHSEEQEYEDPESGEEEKSDDEAEQEEQAEKENDDVVEVTENEVSEKANK
TMNEVVENLNNATNYTFDTKNSRWCELTVLFPVSFLRVDLTQALRDAAARSVIYEIKNIR
RAITNKEKNQLYLKTEGINIVQMSKYNHLLDLNRLYSNDVHAIANTYGIEAANKIITKEI
QNVFNVYGIVVDPRHLSLIADYMTYNGVFEPMSRKGMEASTSPLQQMSFESSLIFLKEAV
LNAKKDFIRSASSCLMLGQPCRSGTGAFSLQHYSKAIN
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaagctcaagattctcgtcggccctgaccgggctgacgtctgtggaccccgac
tctgtgcagtttctcatgtttagcgagcaagacatgcgaaaacttagcgtaacgaaaatc
accaacactatttccttcgattcgatgggcaaccctacaaagggaggcctgtatgatcct
ttgttgggacctttaagagatcgtaatgatttttgtgcaacctgctctaatgccctttta
cactgccctggacatttcggacacatagaattgccgcttatgtgtgtaaatccattattt
atcaagaatatttacagtttattcagaatatcatgcttgaaatgcttcaaagtgcaaatg
gatgatagaatgaagactatattaaaattgcaacttgaactacttgatgcaggccatgtg
actgcagcgctagacttggaaatgtttgtaggtgacgtcaaaggcgaccacaaaagtgaa
acctcaccagaaaagccaaataagtttatcaggaaatgtcaaaaactctttaaaaaaaga
gattgtctcaatgataggttccaaaataaaaatacagataggctacggaccaaaatcata
agtcagtattttaagacaatcaatacatcaaagaattgtttgtattgtagaagtaagctt
atcaaagtaacaatatctgataacaagatcatgtacaacatggctgcggaaactggagtg
ccaggaaagggtattaaaatcttaatgcctgatgatattaaacattattgtgaaaaaatt
gagcaaaacgatgaagatattctcactcattgcatccctgtgctgaggtttgcaaattgc
aagccagttacaggtatattcttcatgcatatgattccagtactaccctctaatgtgaga
ccctgtaatgttttacaaggagaactagttgaacatacacaaacaaaagtgtataaattt
atactggccgctacatatagtgcccgagccgtattgcaagttctaagtgcacctgaccaa
caaaaagctatcgatggtctggaccaacgcccgaggcaagcttatgagggtgttatggga
aaatctccatcagaaaagttgcatacaatatggcaagatctacagaaacaaataaatcaa
gtactcagctgtgaaggacaaggaattgacagtcaaggattgaaacaaatcctggaaaag
aaaactggagtgataaggatgtatatgatgggcaaaagagtgaactttgcagctcgatca
gttatcacacccgatcccaatgttgacattgatgagataggtatacctgatgtgtttgct
acaaaactaacttaccccacacctgtgacagagtggaatgtagatgaattaaggaaaatg
gtgataaatggacccaacaagcatcccggagctgagagattggaagtcaataacggaaga
ataatcagaattccccctgattccttacaaaaaagaaaatcattggccaaaaaactcctt
acacctgatgagtttaaaaattcgggcttgaagattgttcatcgccacttggtcaacggt
gatgtactgatactaaacagacagccttccctccataaacctagtatgatggctcataga
gcaagaatacttaaaggagaaaaaactattagattgcattatgccaattgtaaatcttat
aacgctgattttgatggtgatgaaatgaatgctcatttcccccaaaatgaaattgctaga
agtgaagcctataacatcatgtcagtaaccaagcaatatcttgtgcctaaagatggtaca
ccacttagtggattgattcaagatcatgtaatttctggtgtcagaatgtcgttaaggggt
accttcttttcaaaagctgattaccatcagttagtttttcaagcattatcaaaacacaag
ggtgaaatcaaattgcttcctcctaccattttaaaaccaatcacactttggtctgggaag
caagttttgtctactataataatgaacaccacacccaaaggaaagccatacctttcctta
gatggcaaggcgaaaattaatgcaaaagcgtggcagaaagaaccgccaagagcatgggaa
ggcggaggtgaagtattttcgaatcctgacactatgactgaagcagaagtcattataaga
aagggtgaacttttatgtggagtgctggataaaactcactatggggcaacaccatatggt
ttggttcactgtatgtatgagttatatggtggagacagttcttctgctcttttgagctca
ttttcgaaagttttcactttctatttacaatggctcggattcactctcggcgtcaaggat
attttggttgtcgaagaagctaataaaaaacgtgaagaaattatttccttagttcgccaa
gctggccgagtagctgcaatcaaagctaccgaagtacccgtggacatcgacgacaataag
ctgaaagacactataggagaaatgttgatcaaagatcagaaattccgtgcaaacttagac
agacagtacaaaaatatgcttgattcttacactaatgatatcaacaccacttgtctttcc
aaaggtctattggaaaagtttccatcaaacaatttacaactcatggtgcaatcgggagcc
aaaggttcaacagtcaacaccatgcaaatctcgtgtttgttaggccagattgaattggaa
ggcaaaagaccacctataatgatatcaggacggtctctgcctagttttcccccttacgat
gtctctccgagagcgggtggttttattgacggtcgctttatgacgggaattcaacctcaa
gaatttttcttccactgcatggctggtagagaaggtcttatcgatactgctgtcaaaaca
agtcgttcaggttatctacaaagatgtttgatcaaacacttggaaggtttaagtgtaggt
tatgatcacacagttagagacgctgacagcagtgttattcaatttgcatatggggaagat
ggcttagatgtactgaagtgtcaatttcttaagcaaaaacagttccgttttctggacgtt
aattcgaatgcccttatagcaaaatctgttctaaagaaactcaaagaggatgtagaccca
aaagaaataacaaaagcacaaaaatcgttaaagaaatggaaaaagaagaatggaagccca
ttcgcaaaagtacgaactagtggtttctctcaattttctactttagctaaaaaagatatt
gttttggacgatatgccgacagatcaaactcgagatccaatgtattgggagttagaaaaa
ttgtggcgctcgttagatgaagaagaaaggcagcaatacgttaagaagcggtgtcctgat
ccaatcccgtgcaaaaactcgcctgagtttaagtttgggactatcaacgagcaattggat
ggcttcgtacaggattacttgaaaaatcgccaagaaagcacttacagcgaatttacggag
aaggagaagtttgtcgaagtaatgaacgcgaagtatttagcttccttagcggaaccgggt
gagccagtcgggttgttagccgctcagtcgataggcgagccgtccactcagatgacactg
aacactttccattttgctggaagaggtgacatgaacgtcactttaggtatacctcgttta
cgagaaattttaatgacggcatcagcaaagttaaagacgccaaatatggatatacctttc
cacccaaacatcccagatttgaccagaaaagcggaaaagttgaggcagaaaatgaataga
gtgactgtggccgatgttttggaaaaaatcgatgttcaatgccaaattgtgacagagccg
aacaggcagttgaagacgaccatgcgtttcgcatttctaccgcactcccaatacaaaact
cagtacgcagtgaagccccctcaagttataaagcacatgcagaataaattcttcagcgaa
atgtttgcagttattcgtaagcaggctaaagctacttccggtattctgtgggcgtcggaa
aaagataataagaagcgtcgtgcgatgtctgatgatgaagaggatgaggaagtaactccc
gaagcgcgggagccggccgctgatgctgacagttctgatgaggaagcccctaatgatgac
gatgataatactgatgtgaaaatacgtaaaaaacattctgaggaacaagagtacgaggac
cctgagtctggggaagaggaaaagtcggacgacgaagcagaacaagaggaacaggctgag
aaagaaaacgatgacgtcgtcgaagtcaccgaaaatgaagtcagcgaaaaagccaacaag
acaatgaacgaagtcgtcgaaaacttaaacaatgccacaaactatacattcgacactaaa
aacagcagatggtgtgaactaaccgtgcttttccccgtctcatttctgagggtagacctc
acacaagccctacgcgatgcagctgctagatcagtcatttatgagatcaagaatatcaga
cgagcaatcacgaataaggaaaaaaaccagctgtatttgaagacggaaggaatcaatatt
gtacagatgtccaagtacaatcatttgctggatttgaataggctgtacagtaacgacgtt
catgcgatcgctaacacgtatggcatagaagcagccaataaaattattacaaaggaaata
cagaatgtgtttaacgtctacgggattgtagtggatcccagacatttgtcgttgatcgca
gattatatgacttataacggagtgtttgaaccgatgagtcggaaaggtatggaagcgtcc
acatctccgttgcaacaaatgtcctttgaatcttcactaatattcttgaaggaagccgta
cttaatgctaagaaggattttataagatcggcgtccagttgtctgatgttgggccagcct
tgcagaagtggaacgggtgcattcagtttacaacattatagcaaagcaatcaattaa
DBGET
integrated database retrieval system
