Maniola jurtina (meadow brown): 123874861
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Entry
123874861 CDS
T09254
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123874861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123874861
Enzymes [BR:
mju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
123874861
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
123874861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
MMR_HSR1
AAA_10
RsgA_GTPase
AAA_16
AAA_24
Motif
Other DBs
NCBI-GeneID:
123874861
NCBI-ProteinID:
XP_045776356
EnsemblRapid:
ENSMJUG00000002036
LinkDB
All DBs
Position
19:complement(11392047..11397278)
Genome browser
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLEPDSELRFEVESRNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCTVELRGRTEVSYIAKETPMVVYLNVHAALEQQRVAAEQENTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMARRPIYVDLDVGQGHISVPGTVGALLVERPASIEEGFSQQAPLV
YHFGHKSPGENLELYNTIVSRLAEVIAERCENNKKASTSGVIINTCGWVKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSSSQRAEARDARIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEDALTKLVNVWPSAALAHRV
LSVSFAGGPDDHVLHCNLAGFVCVTAVDMERQTLTILSPQPRPLPNTVLLLSDLQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagtgcagttgcaagaattcaaattggagccagactccgaacttcgtttcgaa
gttgaatccagaaacgaaaaagttgttttggaggttaaaagtgggtacgcggagttattt
ggcacggagctggtcaaaggaaaaccatatgagtttcacactggtgccaaggtagccgtt
ttcacgtggcacggctgcacggtggagctgcgaggacgcacggaagttagctatatcgct
aaagaaacaccaatggtagtatatctcaatgtacatgcagcattggaacaacagagggtc
gcagcagaacaggagaacaccagaggcccggtgaccatggtggtgggcccgggtgacgtg
ggcaagtccacattgaccaggatcctgctcaactatgctgtgaggatggccagacgccca
atatatgtggacttggatgttggccaggggcatatcagtgtaccagggactgttggggca
ttgctagtagagcggcctgcatctatagaggaaggcttcagtcaacaggcgcctctggtg
taccactttggtcacaagagccccggggaaaacctggagctctacaatactatagtttca
cgactagctgaggtcattgcggagcgctgcgaaaataataagaaagcatcaacatcaggt
gtaataatcaacacatgtggttgggtcaaaggcgccgggtacaaagttttaacgcatgct
gcacaagcgtttgaagtggatgtgatattagtgttagacaatgaaagactgtacaatgaa
ctgaagagggacatgccaaagtttgtcaaagttgtatatctgcctaagagtggaggggtg
gtagagagatcgtcaagtcagcgcgcggaagctcgcgacgcgcgaataagagaatacttc
tacgggaagcgaaccccctactatccacactcgtttgacgtcaagttctccgatttgaaa
atttataaggtgggcgcgccgtcgctaccagactcgtgcatgccactaggcatgcgggca
gaagatgcgcttacgaagctagtcaatgtgtggccttcagctgccttagcccatcgagtg
ctctctgtatcattcgcgggcggccccgacgaccacgtgctgcactgtaacctcgccggg
tttgtctgtgtgacggcggtagatatggagcgacaaactctgaccatcttatcgccacag
ccgcgaccgcttccaaacactgttctactactctccgacctacagtatatggataatcac
tag
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