KEGG   Maniola jurtina (meadow brown): 123874861
Entry
123874861         CDS       T09254                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
mju  Maniola jurtina (meadow brown)
Pathway
mju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123874861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mju03019]
    123874861
Enzymes [BR:mju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     123874861
Messenger RNA biogenesis [BR:mju03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     123874861
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 CbiA MMR_HSR1 AAA_10 RsgA_GTPase AAA_16 AAA_24
Other DBs
NCBI-GeneID: 123874861
NCBI-ProteinID: XP_045776356
EnsemblRapid: ENSMJUG00000002036
LinkDB
Position
19:complement(11392047..11397278)
AA seq 420 aa
MTEVQLQEFKLEPDSELRFEVESRNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCTVELRGRTEVSYIAKETPMVVYLNVHAALEQQRVAAEQENTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMARRPIYVDLDVGQGHISVPGTVGALLVERPASIEEGFSQQAPLV
YHFGHKSPGENLELYNTIVSRLAEVIAERCENNKKASTSGVIINTCGWVKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSSSQRAEARDARIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEDALTKLVNVWPSAALAHRV
LSVSFAGGPDDHVLHCNLAGFVCVTAVDMERQTLTILSPQPRPLPNTVLLLSDLQYMDNH
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaccgaagtgcagttgcaagaattcaaattggagccagactccgaacttcgtttcgaa
gttgaatccagaaacgaaaaagttgttttggaggttaaaagtgggtacgcggagttattt
ggcacggagctggtcaaaggaaaaccatatgagtttcacactggtgccaaggtagccgtt
ttcacgtggcacggctgcacggtggagctgcgaggacgcacggaagttagctatatcgct
aaagaaacaccaatggtagtatatctcaatgtacatgcagcattggaacaacagagggtc
gcagcagaacaggagaacaccagaggcccggtgaccatggtggtgggcccgggtgacgtg
ggcaagtccacattgaccaggatcctgctcaactatgctgtgaggatggccagacgccca
atatatgtggacttggatgttggccaggggcatatcagtgtaccagggactgttggggca
ttgctagtagagcggcctgcatctatagaggaaggcttcagtcaacaggcgcctctggtg
taccactttggtcacaagagccccggggaaaacctggagctctacaatactatagtttca
cgactagctgaggtcattgcggagcgctgcgaaaataataagaaagcatcaacatcaggt
gtaataatcaacacatgtggttgggtcaaaggcgccgggtacaaagttttaacgcatgct
gcacaagcgtttgaagtggatgtgatattagtgttagacaatgaaagactgtacaatgaa
ctgaagagggacatgccaaagtttgtcaaagttgtatatctgcctaagagtggaggggtg
gtagagagatcgtcaagtcagcgcgcggaagctcgcgacgcgcgaataagagaatacttc
tacgggaagcgaaccccctactatccacactcgtttgacgtcaagttctccgatttgaaa
atttataaggtgggcgcgccgtcgctaccagactcgtgcatgccactaggcatgcgggca
gaagatgcgcttacgaagctagtcaatgtgtggccttcagctgccttagcccatcgagtg
ctctctgtatcattcgcgggcggccccgacgaccacgtgctgcactgtaacctcgccggg
tttgtctgtgtgacggcggtagatatggagcgacaaactctgaccatcttatcgccacag
ccgcgaccgcttccaaacactgttctactactctccgacctacagtatatggataatcac
tag

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