Manis javanica (Malayan pangolin): 108397963
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Entry
108397963 CDS
T06054
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X5
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv00310
Lysine degradation
mjv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108397963 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108397963 (PRDM2)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108397963 (PRDM2)
Enzymes [BR:
mjv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
108397963 (PRDM2)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108397963 (PRDM2)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108397963 (PRDM2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2H2_11
ZNF428
Motif
Other DBs
NCBI-GeneID:
108397963
NCBI-ProteinID:
XP_017517133
LinkDB
All DBs
Position
4:9851674..9982074
Genome browser
AA seq
1508 aa
AA seq
DB search
MRDSVGDPREEDEEPVASAVEQTAVLQELVGQEVLPELVDPPPACKPQTEPEEKLEAAPG
EMNEEEEEEEEEEEEDDELEEEGEEEADVPSESSMKEPEIRCDEKLEDLLEEPKNTSKET
LEDSLEVMPVLRIPKTKEEANGDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAF
KCKYCGKAFGTQINRRRHERRHEAGLKRKPSLALQPSEDPADGKVSGDGVTPKDDANPPS
LGQDCLILNSEKASQEIVNSSVVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHL
IPKGVRRKGGLLEEPQPPAEQAQPVQSVYVPSTEPEEEGEADDVYIMDISSNISENLNYY
IDGKIQTSSSTSNCDVIEMESNSADLYGINCLLTPVTVEITQNVKTTQVPITDDLPKEPS
SSTNVESKKRRTASPPVLPKVKAETGSDPGAPSCSLSLPLSISTAEAASFHKEKSVYLSS
KLKQLLQTQDKLTPPAGISATEIPKLGPICVSVPASMLPVASSRFKRRTSSPPSSPQHSP
ALRDFGKQSDGKAVWADAVLSSKKPKLESHSNSPVWSLSGRDERETVSPPSFDEYKLPKE
WAASSTFSSVCNQQPLDLSSGVKQKVEGTGRTPVQWESVLDLSVHKKPCSDSEGKEFREN
HLVPSAGSALKKKKPTTCMLQKVLLNEYNGLDVPTENTPDVTGSPSPRKSQDPQPDASLG
PDSALSDPTVESPHDVSPSSPALQASSLSAGQLPPLLIPTNASSPPPCPPVLTLATPPPP
LLPTVPLPAPSSGASPHQCPSPLSNATAQSPLPILSPTVSPSPSPIPSVEPLMSAASPGP
PTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSSGDNLEASLPMISFKQEELESE
ELKPRGEPQPAVEQDIIQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEDWPFKCEFCVQ
LFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKACTHHEFESGTL
RPQNFTDPSKAHIEHMQRLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRL
GLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELH
KHILACASASDKKRYTPKKNPVPLKQTVQPRNGVVVLDASGQHAFRRMGQPKRLNFTVEL
SKMSSNKLKLSALKKKNQLVQKAILQKNKLAKQKADLKNASASSSHICPYCNREFTYIGS
LNKHAAFSCPKKPLSPSKKKVFYSSKKGGHSLPASSDRNNSGSHRRRTADAEIKMQSMQA
PLGKTRARSSGPTQVPLPSSSFRSKQNVKFAASVKSKKPSSSLRNSSPIRMAKITHAEGK
KSKAVAKNHSAQLSSKASRSLHVRVQKSRAILQSKSALASKKRTDRFNVKSRERSGGPVT
RSLQLAAAADPGENRREDSSGKQELKDVSYSLRLASRCAPPAVPYITRQCRNVKAMAAPQ
FQGPIFKE
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgagggattctgtaggagatcccagagaagaggacgaggagcctgtggcttcagcggtt
gagcagacagccgtgcttcaggagctcgtcggccaggaagtgcttccagagctagtagac
cctccccctgcctgtaagccacagacagaaccagaggagaagctagaagcagcgcctggt
gagatgaatgaggaggaggaggaggaggaggaggaggaggaggaagatgatgagctggaa
gaagaaggggaagaagaagctgatgtgccaagtgaaagttctatgaaagagccagaaata
cggtgtgatgagaagctagaggatttattagaagaaccaaaaaatacttcaaaagaaacc
cttgaagactctctagaggtaatgcctgttctcagaattcctaaaactaaagaagaggcc
aatggtgatgtatttgaaacatttatgtttccgtgtcagcattgtgaaaggaagtttaca
accaaacagggacttgaacgtcacatgcacatccatatatctacagtcaaccatgctttc
aaatgcaagtactgtgggaaagcatttggcactcaaattaacaggaggaggcacgagcgt
cgccacgaggcagggttaaagcgaaagcccagcctagcactacagccatcggaagaccca
gctgatggcaaagtgtctggagacggtgtcactccaaaagacgacgcaaatcctcccagt
cttgggcaagactgtctgatcttaaattcagagaaagcttcccaagaaatagtaaattct
tctgttgtagaagagaacggagaagtcaaagagcttcatccatgcaaatactgtaagaag
gtttttggaactcatactaatatgagacggcatcagcgtagagttcacgaacgtcatctg
attcccaaaggtgtacggcgaaaaggaggcctcctcgaagagccacagcctccggcagag
caggcccaacccgtccagagtgtgtatgtaccaagcacagaaccagaggaggagggagag
gcagatgatgtgtacatcatggacatttctagcaatatttctgaaaacttaaattactat
attgatggtaaaatccaaaccagcagcagtactagtaactgtgacgtgattgagatggaa
tccaattcggccgacttgtatggtataaattgtctgcttactccagttacagtggaaatt
actcaaaatgtaaagactacacaggtccccataacggatgaccttcctaaagagccttcc
agcagcacaaacgttgagtccaagaagcggagaactgctagcccgcctgtgttgcccaaa
gttaaagctgaaacagggtctgaccctggtgcgccttcctgctccttaagtctgcctctt
agcatatcgaccgcagaggcagcatctttccacaaggagaagagtgtgtatttgtcatcg
aagcttaaacagcttcttcaaacccaggataaactaactcctcctgctgggatttcagca
actgaaatacctaagttaggtcccatttgtgtgtccgttcctgcatccatgctccctgtg
gcctccagtcggtttaagcggcggaccagctctcctcccagctctccacaacacagccct
gcccttcgagactttggaaagcaaagcgatgggaaagcagtgtgggctgatgcagttctg
agttccaaaaaacccaaattagaaagtcatagcaactcaccagtgtggagtttatctgga
agagatgagagggaaaccgtcagcccaccaagctttgatgaatataaactacctaaagag
tgggcagccagttctacttttagcagtgtgtgcaaccaacagccactggatttatccagc
ggtgtcaaacagaaggttgagggaacaggcaggactccagtccagtgggaatctgtgtta
gatctcagtgtgcataaaaagccttgcagtgactctgaaggcaaggaattcagagaaaat
catttggtaccatcagctggcagtgctcttaagaaaaagaaaccaaccacctgcatgcta
cagaaggttcttctcaatgaatacaacggcctcgatgtacctacagaaaacactccggat
gtgaccgggagccccagtcctcgtaaatcccaagatccccagccagatgctagcctcggt
ccggactctgctctctctgaccccactgtcgagtccccgcatgatgtttctccttcgtca
cctgccctgcaggcatcttccctttctgcggggcagctgcctcctctcttgatccccaca
aatgcctcgtcccctccaccctgccctcctgtgttgactttagccacaccaccccctccg
ctcctccctactgtccctctcccagccccctcttctggcgcatctcctcaccagtgcccc
tctccactctcaaatgctacggcccaatccccactgccaattctctcccccacggtgtca
ccctcgccgtcccccattccgtctgtggagcctcttatgtctgctgcttcacctgggcct
ccaacactttcctcctcatcttcctcctcatcttcctcatcttccttttcctcttcatcc
tcctcctcctccccttcgccccctcctctctcagcagtgtcatctgttgtttcctctggg
gataatctcgaagcttctctgcccatgatatctttcaaacaggaggaattagagagtgaa
gagctgaaacccaggggtgaaccccagcctgcagtcgaacaggatattattcaggaaacg
ttcaacaaaagctttgtctgtaatgtctgtgaatcaccttttctttccattaaagatcta
accaaacatttatccattcatgctgaagactggcccttcaaatgtgaattttgtgtgcag
ctttttaaggctaaaactgacctgtcagaacatcgctttttgcttcacggagttggaaat
atctttgtgtgttcagtttgtaaaaaagaatttgcttttttgtgtaatttgcagcagcac
cagcgagatctccacccagataaggcgtgcacacaccatgagtttgaaagtggcaccctg
aggcctcagaacttcacagatcccagcaaggcccacattgagcatatgcagcgcttgcca
gaagatcctttagaaacgtctaaggaagaagaggaactaaatgattcctccgaagagctt
tacacgaccataaaaataatggcttcaggaattaagacgaaagatccagatgtacgattg
ggtctcaatcaacattacccaagctttaaacctcctccatttcagtaccatcacagaaac
cccatgggtatcggtgtgaccgccacaaatttcactacacacaatattccacagactttc
actaccgccattcgctgcacaaagtgtgggaaaggtgtcgacaatatgcctgagttacac
aaacatatcctggcatgtgcttctgctagtgacaagaagaggtatacccctaagaaaaat
ccagtccccttgaagcaaactgtgcaacccagaaatggtgtggtggttttagatgcctct
gggcagcatgccttcagacggatgggacagcccaaaagactgaacttcacggttgagctc
agcaaaatgtcatcaaataagctcaagttaagtgcattgaagaaaaaaaaccagcttgtc
cagaaagcaatcctgcaaaaaaacaaattggcaaagcagaaggctgacttaaaaaatgct
tctgcgtcttcctcacatatctgcccgtactgtaacagagagttcacgtacatcggaagc
ctgaacaagcacgccgctttcagctgtcccaaaaagcctctgtctccttccaaaaaaaaa
gttttctattcctccaagaaaggcggacactcattacctgcaagtagtgacagaaacaat
agtggtagccaccgcagacggacagcggatgccgagattaaaatgcaaagcatgcaggct
cccttgggcaagaccagagcccgcagctcaggccccacacaagtccccctgccctcctcg
tcgttcaggtccaagcagaatgtcaaatttgcagcttcggttaaatccaaaaaaccaagc
tcctctttgaggaactcgagcccgataagaatggccaaaataactcatgccgaggggaaa
aaatccaaagctgtggccaagaatcattctgctcagctctcaagcaaggcgtcccggagc
ctgcatgtgagagtgcagaaaagcagagccatcttacaaagcaaatctgctttggccagt
aagaaaagaacagaccggttcaatgtaaaatctagagaaaggagtgggggacctgtcacc
cgcagcctccagctggcagctgctgccgacccaggtgaaaacaggagggaggacagcagt
ggcaagcaggagctgaaggacgtcagctacagcctccgcctggcatcccgatgcgctcca
ccggccgtgccgtacatcaccaggcagtgtaggaatgtcaaggccatggccgcaccccag
ttccagggacctatcttcaaagagtag
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integrated database retrieval system
