Manis javanica (Malayan pangolin): 108408698
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Entry
108408698 CDS
T06054
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108408698 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108408698 (POLR1A)
Enzymes [BR:
mjv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108408698 (POLR1A)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108408698 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
CDC45
Motif
Other DBs
NCBI-GeneID:
108408698
NCBI-ProteinID:
XP_036867950
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MLGSKTIPWRRLQGISFGMYSAEELKKLSVKSITNPHYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFSHCPGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCSRAVIHLL
VCQLRVLEVGALQAVYELERILNRLLEENADPTAFEIQEKLEQYTATIVQNNLVGSHSAH
QVKNVCESRSRLTASFWKAHMTAKRCPHCKTGRSVIRKEHNSKLTVAYPAMVHKKADRKD
SEPPGIEEAQLGKRGYLTPISAREHLLTLWKNEGFFLNYLFLGLEDVGMESRFNPSVFFL
DFLVVPPSRYRPVSRLGDQMFTNGQTVNLQVVMKDMVLIRKLLALMAQERELPCEVAAPA
TVEEKDSSVAIDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQ
ILEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQE
LRQAVINGPTVHPGASMVINEDGSRTALSAVNLTQREAVAKQLLTPATGAPKPQGTKIVC
RHVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFTREQYMELVYR
GLTDKVGRVKIFPPAILKPFPLWTGKQIVSTLLINIIPEDHIPLNLTGKAKISGKAWVKE
PPRRVPSFNPDSMCDSQVIIRAGELLCGVLDKAHYGSSAYSLVHCCYEIYGGETSGKVLT
CLARLFTAYLQLYRGFTLGVEDILVKPKADAKRQRIIEESTHCGPRAVRAALNLPEAASC
DEVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLYRQFPENNLQMMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPTAGGFVTGRFLTGI
RPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLY
GEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQNKH
SHTLMRKGAFLNYSQKVQAAVKAFNLESGNQNGRSLETHQILRMWGELDEQSRRKYQKRA
APCPDPSLSVWRPDIYFASVSETFEKNVDDYSLEWASQAEKNYEKSELSVDRLRTLLQLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVFHTKKALKRVKHLKKQLTRVCLGEVLEKIDVQESFCMGEKQNKFRMYQLRF
QFLPHAYYQQEKCLRPKDILHFMETRFFRILMEYIRKKNNKASTFISIDTRRATQWDLDN
TRESGRNPGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEKQGEE
DDEDMQEDGHIHGEGAHNAQEQEEDVGSGPEDGSPPTGPLTQPHKPAGSREPQGAEAVER
RVQAVLQSHAFIEDYQYDTEESLWCQVVVKLPLMKMIFDMSSLVVALAHDAIVYTTKGIT
KCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSFQF
LKQATMMGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaaaacaattccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagagctcaagaaattaagtgttaagtccattaccaaccctcactacctggac
agcctggggaacccgtcggtgaacggcctatacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgtgtgcaggacttcagccactgccctggccacctgggccac
atcgagctgccactcaccgtgtacaaccctctcctctttgataaactttaccttctgctc
aggggctcctgtttaaattgtcacatgctgacttgctcccgggctgtgattcatctctta
gtgtgccagctaagagtcctggaagttggggccctgcaagcagtctacgagcttgagaga
attctgaacaggcttctggaagaaaatgctgatcctactgcctttgaaattcaggaaaaa
ctagaacaatatacagccacaattgtacagaataaccttgtggggtcccacagtgcacat
caggtaaaaaatgtctgtgagagcaggagcagactcactgcttccttctggaaggcccat
atgactgctaagcgatgtccccattgcaagaccgggcggtcggttatccgaaaggagcac
aacagcaaactgacagttgcatacccagctatggtgcacaagaaagctgaccggaaggac
tcagagcccccaggaattgaggaagctcagttgggaaaacgagggtacctgacacccatc
agtgcccgagaacatcttctcaccctttggaagaatgaaggattctttctgaattacctt
ttcttgggattggaagatgttggcatggagtccagatttaaccccagtgtgttctttctg
gatttcttggtggtcccaccctcaaggtatcgccctgtcagtcgcctgggggaccagatg
tttaccaatggccagacggtcaacttgcaggttgtcatgaaggacatggttctgatccga
aagcttctggcactgatggcccaagagcgggagctcccgtgtgaggtggcagcacctgcc
acagttgaggaaaaagactcttcagttgctattgaccgatcctttttgagtatgctgcca
ggccagtccctcacagacaaactttacaacatttggattcgccttcagagccacgtcaac
attgtatttgacagtgagatggacaaattaatgatggaaaaataccctggcattagacag
atcctggagaaaaaagatggcttattccgaaagcacatgatgggaaaacgagtagactac
gcagcccgctcagtcatctgcccagacatgtacatcaacaccaacgagattggaattccc
atggtgtttgccacaaaactgacctaccctcagccagttaccccctggaacgttcaggag
ctgaggcaagcagtcatcaatggccccactgtgcacccaggagcctccatggtcatcaat
gaggatggcagtcgcacggccctgagtgccgtgaacctgacccagcgggaggctgtggcc
aaacagctcctgacacccgccaccggggctcctaagcctcaggggaccaaaattgtgtgc
cggcatgtgaagaatggggacatcctgctcctgaaccgacagcccactctgcacaggccc
tccatccaggcacaccacgcccgtatcctgcccgaagagaaagtcctgcggctccactat
gccaactgcaaagcctataatgccgactttgatggagacgagatgaacgcccacttcccc
cagagtgaactgggccgggctgaggcctacgtcctggcctgcacggatcagcagtacctc
gttcccaaggatggccagccattggctgggttgatccaagatcacatggtttcaggtgca
aacatgaccactcgaggttgctttttcactcgggagcagtatatggagctggtataccga
ggactcacagacaaagtggggcgtgtgaagatctttcctcctgccatcctgaaacctttt
ccactgtggacaggaaaacagattgtctcaacgctgctgataaacataatcccagaggac
cacatcccactgaacttgacgggaaaggcgaagatcagcgggaaagcctgggtgaaggag
cctcctcggcgagttcccagctttaaccctgactcgatgtgtgattcccaggtgatcatc
agggccggggagctgctttgcggagtgctggacaaagcgcactacgggagctccgcctac
agcctggtccactgctgctatgagatctacggtggggagacgagcggcaaggttctcacc
tgcctggctcgcctcttcacggcctacctgcagctctacagaggcttcactctgggtgtg
gaagacattttggttaagccaaaggcggatgctaagagacaaaggatcattgaagagtcc
acccactgtgggccccgggctgtgagggctgcgttaaatctgccagaagccgcgtcatgt
gatgaggtccaagggaaatggcaggatgcccatctgagcaaagaccagagggattttaac
atgattgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggct
tgcatgccttttggcctgtacaggcagttcccagagaacaacttgcagatgatggtacag
tctggagccaaagggtcaactgtgaacaccatgcagatctcgtgcctgctgggccagatt
gaattggaaggtcggagacccccgctgatggcatctggcaagtccctgccctgcttcgag
ccttatgaattcacccccacggctggcggctttgtcactggcagattcctcactggcatc
aggcctcctgagttcttctttcactgcatggcagggcgagagggtctggtcgacaccgct
gtgaaaaccagccgctccggctatctccaaaggtgtatcatcaagcacctggaggggctg
gtggtccagtacgatctgacagtccgcgacagtgacggcagcgtggtgcagttcctgtat
ggggaggatggcctggacatccccaagacgcagttcctgcagcccaagcagtttcccttc
cttgccagcaactatgaggtgataatgaaatcgaagcatctccatgaggttttatccaga
gcagatccccaaaaagctctccgccacttcagagccatcaaaaaatggcaaaacaagcat
tcccacacgctcatgagaaaaggtgccttcttgaattattcccagaaagttcaggcagct
gtgaaagcctttaacctcgagagcgggaaccagaatggccgcagcctcgagactcaccag
atattgaggatgtggggtgagttagatgagcagagccgaaggaaataccagaagagagcc
gctccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatcggtg
tcggaaacatttgagaaaaacgtggatgactacagccttgagtgggcatctcaagcagag
aagaattatgagaaatcagagctttctgttgacaggttgaggaccctcctgcagctgaag
tggcagcgttccctgtgtgacccgggtgaggccgtgggcctgctggccgcccagagcatt
ggggagccttccacacagatgaccctgaacaccttccactttgccggcagaggcgagatg
aatgtgaccctgggcatcccaaggttgagagagatcctcatggtggccagcgccaacatc
aagacacccatgatgagtgtgcctgtgttccacaccaagaaagcattgaagagggtcaaa
cacctgaagaagcagctcaccagagtgtgcttaggggaggtgttggagaaaattgatgtc
caagagtctttctgtatgggggaaaagcagaacaagttccggatgtaccagctacggttt
cagttcctgccacatgcatattaccagcaggagaagtgcctaaggcccaaggacatcctg
cacttcatggaaacaagattctttagaattctgatggaatacatcagaaagaagaataat
aaagcctcaactttcataagcatagacactcggagagctacccagtgggatctagataac
accagggagtcaggaaggaatccgggagagcaggaaggcgatgaggaagaggagggccac
attgtggatgccgaagctgaggagggcgatgctgatgcctctgacgccaaacgcaaggag
aagcaagaggaggaggtggattatgagagtgaggaagaggaggagaagcagggggaggag
gacgacgaggacatgcaggaggatgggcacatccatggggaaggcgcccacaatgcccag
gagcaggaagaagatgtgggctcaggccccgaggatggctcaccccccactggccccctg
acacagccccacaaacctgctggcagccgggagccccagggcgccgaggccgtggagcgg
cgcgtgcaggctgtgctccagtcgcacgcgttcatagaggactatcagtacgacacggag
gagagcctgtggtgccaggtggtggtgaagctccctctaatgaagatgatctttgacatg
agctccctcgtcgtggccttggcccacgatgccattgtctacacaaccaagggcatcaca
aagtgcctcctgaatgaaaccaccaacaataagaatgagaaggagcttgtcttaaacaca
gaaggaatcaacctcccggagctgttcaagtatgctgaggttctggatttgcgtcgcctc
tattccaatgacatccacgccatggccagcacctacggcattgaggccgcgctgcgggtg
atcgagaaggagatcaaggatgtgtttgctgtgtatggcattgcagtcgatccccgccat
ctctccctggtcgccgactatatgtgcttcgagggtgtttacaagccactgaatcgcttt
gggatccagtcaaactcctctcctctgcagcagatgacgtttgaaaccagcttccagttt
ctgaagcaggccaccatgatggggtcccacgatgagctgaggtccccttcagcctgcctt
gtggtcgggaaggtcgtcaggggcgggacgggcctgtttgagctcaagcagcccctgagg
tag
DBGET
integrated database retrieval system
