Microvirga lotononidis: U0023_19625
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Entry
U0023_19625 CDS
T09656
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mld03009
]
U0023_19625 (rimO)
Enzymes [BR:
mld01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
U0023_19625 (rimO)
Ribosome biogenesis [BR:
mld03009
]
Prokaryotic type
ribosomal protein modification factors
U0023_19625 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DarA_N
PUA
Motif
Other DBs
NCBI-ProteinID:
WQO26848
LinkDB
All DBs
Position
complement(4146863..4148179)
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AA seq
438 aa
AA seq
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MNAPAPKVSFVSLGCPKALVDSERIITQLRAQGYQLTKEHDGADVVIVNTCGFLDSAKAE
SLEAIGEAMAENGKVIVTGCMGAEPEQIRDQFPNVLAITGPQAYESVVSAVHQAVPPAHD
PFVDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPIADVLREAEKLAK
AGVKELLVISQDTSAYGLDIKYQPSLWKDREIRTRFFELAKELGDLGMWVRMHYVYPYPH
VDEVIPLMAEGKILPYLDIPFQHASPRVLKSMRRPGNQEKTLERIHKWREICPDLAIRST
FIVGFPGETEEDVDVLMQWLKEAKIDRAGCFQYEPVQGAPANDIDGPVPPEVKEERWHRF
MQTQQAVSARILKSKVGKTLPVIIDEQGATVATGRTQYDAPEIDGVVYVASKTPLKPGQV
VNVKIQSSDEYDLHGTVV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgcgccgaaagtctcgttcgtatccctgggctgtccgaaggccctggtg
gattccgagcgcatcatcacccagcttcgcgcccaaggttaccaactgaccaaggagcat
gacggggccgacgtggtgatcgtcaacacctgcggcttcctcgacagcgccaaggccgag
tctctggaagccatcggcgaggccatggccgagaacggcaaggtcatcgtcacggggtgc
atgggcgccgagcccgagcagatccgcgaccagttcccgaacgtccttgcgatcaccggc
ccccaggcctacgaatccgtggtctcggccgtgcatcaggccgtaccgcccgcccatgac
cccttcgtggacctcgtcccgccccagggcgtaaagctgacgccgcgccactatgcctat
ctgaagatttcggagggctgcaataaccgctgctcgttctgcatcattccgaagctgcgc
ggcgatctcgtcagccgtcccatcgccgatgtgctgcgcgaggccgaaaagctcgccaag
gcaggcgtcaaggaactcctggtcatttcccaggacaccagcgcctacggcctcgacatc
aagtaccagccgagcctgtggaaggaccgagagatccgcacgcggttcttcgagctcgcc
aaggagctcggcgatctcggcatgtgggtgcgcatgcactacgtctatccttacccgcat
gtggacgaggtcatcccgctgatggccgagggcaagatccttccctatctggacatcccg
ttccagcacgcctccccgcgcgtcctgaaatccatgcgccgtcccggcaaccaggaaaag
accctggagcgcatccacaagtggcgcgagatctgccccgatctcgccatccgctcgacc
ttcatcgtcggcttccccggcgagacggaagaggacgtggatgtcctgatgcaatggctg
aaggaggcaaagatcgaccgcgccggctgcttccagtacgagccggtccagggcgcgccc
gccaacgacatcgacggcccggtcccgcccgaagtgaaggaagagcgctggcaccgcttc
atgcagacccagcaggcggtcagcgccaggatcctcaagagcaaggtcggcaagaccctg
ccggtcatcatcgacgagcagggcgccacggtcgcgaccggccgcacccaatacgacgct
cccgagatcgatggcgtcgtctacgtggcctcgaagacgccgctgaagccgggtcaggtc
gtgaacgtcaagatccaaagctccgacgagtacgacctgcacgggacggtggtttaa
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