Microvirga lotononidis: U0023_22840
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Entry
U0023_22840 CDS
T09656
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
mld
Microvirga lotononidis
Pathway
mld00190
Oxidative phosphorylation
mld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
U0023_22840
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0023_22840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mld03019
]
U0023_22840
Enzymes [BR:
mld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
U0023_22840
Messenger RNA biogenesis [BR:
mld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
U0023_22840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WQO29912
LinkDB
All DBs
Position
complement(4850462..4852630)
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AA seq
722 aa
AA seq
DB search
MPKAPPDIELDGAVLRKFPQRFINRELSWLEFNRRVFEEASNRNHPLLEQLRFLSISADN
LDEFFMVRVAGLIGQVRSGVATASQDGLTPQEQLAKISVAVSHLASDQQRRWRELRDALL
EEGIVLTEGAGLTKAEASWLEDYFLNHVFPVLTPLAIDPAHPFPFIPNLGSSIALKLVRQ
SDGKVLNALIRLPSRAERFIRLPDFAETGATRFIALEQMIVLYTSRLFPGYAVQGQGAFR
VIRDSDIEVEEEAEDLVRLFETALKQRRRGSVIRLEVEAAMPEDLRLFVAEEMEVSNDEV
FVVEGMMGLRDLSQLVALERPDLKFKPYNPRFPERIREHSGDCFAAIREKDIIVHHPYES
FDAVVQFLRQAARDPNVVAIKQTLYRTSSDSPIVAALAEAAEAGKSVTALVELKARFDEE
ANIRWARDLERAGAQVVFGFIELKTHAKLSMVVRREGSQLITYCHVGTGNYHPITARIYT
DLSYFTADPAIGRDVSRIFNFVTGYAEPAELERMAVSPLTLKKRLLQHIEEEVAHAKAGR
PGAIWGKCNSLVDADIIDALYDASAAGVQVDLIVRGICCLRPGIQGLSENIRVKSIVGRF
LEHTRIYAFGNGQGLPNPKAHVYISSADLMSRNLDRRVEALMPILNPTVHQQVLDQIMLA
NLLDNEQSWTVLPDGSSQRVVPAKGEEPFNAHKYFMTNPSLSGRGKSLKTSSPKALAKRG
QR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ttgccgaaggcgccgccggacatcgagctcgatggggcggtgctgcggaagttcccccag
cgcttcatcaatcgcgagctgtcctggctggagttcaaccgccgggtcttcgaggaggca
tcgaaccgcaaccatccgctcctcgagcaattgcgtttcctatcgatctcggccgacaac
ctggacgagttcttcatggtccgcgtcgcgggcctgatcgggcaggttcgctcgggcgtc
gccacggcctcccaggatgggctcacgccgcaggagcagctggcgaagatctccgtggcg
gtgtcccatctcgcctctgaccagcagcggcgctggcgcgagttgcgggacgcgctgctg
gaggagggcatcgtcctcaccgaaggggcggggctgacgaaggcggaggcgtcctggcta
gaggattacttcctcaaccacgtcttccccgtgctgacgccgctcgccatcgatccggcg
catccctttccgttcatccccaatctcggctcctccatcgccctgaagcttgtgcgccag
agcgacggcaaggtgctgaatgcgttgatccgtctgccgtcgcgggccgagcggttcatc
cgcctgccggatttcgccgagacgggcgctacccgcttcatcgcgctggagcagatgatc
gtcctctacacgagccgccttttccccggatacgcggtgcaggggcagggcgccttccgg
gtgatccgcgattccgacatcgaagtggaggaggaggcggaggatctcgtccgcctgttc
gagacggcgctcaagcagcgccggcgcggcagcgtgatccggctggaggtcgaggccgcc
atgccggaggacctgcgcctcttcgtggccgaggagatggaggtgtccaacgacgaggtc
ttcgtcgtcgagggcatgatgggcctgcgggacctgtcccagctcgtcgctctggaacgg
cccgacctcaagttcaagccttataatccgcggttccccgagcgcatccgcgagcatagc
ggcgattgcttcgcggcgatccgcgagaaggacatcatcgtccaccacccttacgaatcc
ttcgacgcggtggtgcagttcctgcgtcaggcggcccgcgacccgaacgtggtggcgatc
aagcagacgctctaccgcacatcgtcggattcccccatcgttgcggcgctcgccgaagcc
gccgaggccggtaagtccgtcaccgccctcgtggagctgaaggcgcgcttcgacgaggag
gccaatatccgctgggcgcgcgacctggagcgcgccggcgcccaggtggtgttcggcttc
atcgagctgaagacgcacgcgaagctgtccatggtcgtgcgccgcgaaggcagccagctc
atcacctattgccatgtgggcacgggcaactaccacccgatcaccgcgcgcatctacacc
gatctgtcctatttcaccgccgatccggcgattgggcgggacgtgtcgcgcatcttcaac
ttcgtgaccggctatgcggaacccgccgagctggaacgcatggcggtgtcgcccctcacc
ctgaaaaagcggctgctccagcatatcgaggaagaggtggcccatgccaaggcggggcgg
ccgggggcgatctggggcaagtgcaactccctcgtcgacgcggacatcatcgatgcgctg
tacgacgcgagcgcggcgggcgtgcaggtcgatctcatcgtgcgcggcatctgctgcctc
aggccgggcatccagggcctgtcggagaacatccgggtcaagtccatcgtcgggcgcttc
ctggagcacacgcgcatctatgccttcggcaacgggcaggggctgccgaacccgaaggcc
catgtctatatctcgtcggccgatctcatgtcgcgcaacctcgaccgtcgcgtcgaggcc
ctgatgccgatcctcaatccgaccgtgcaccagcaggtgctcgaccagatcatgctcgcc
aacctcctcgacaacgagcagagctggacggtgctccccgacggctcgagccagcgggtg
gtgccggccaagggcgaggaaccattcaacgctcacaagtatttcatgacaaatccgagt
ctgtcgggccgtggcaaatccctcaaaacctccagccccaaggcgctcgccaagcgcggg
caacgctga
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