Metabacillus litoralis: KDJ21_006355
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Entry
KDJ21_006355 CDS
T08411
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
mlit
Metabacillus litoralis
Pathway
mlit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDJ21_006355 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlit03021
]
KDJ21_006355 (rpoE)
03400 DNA repair and recombination proteins [BR:
mlit03400
]
KDJ21_006355 (rpoE)
Transcription machinery [BR:
mlit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KDJ21_006355 (rpoE)
DNA repair and recombination proteins [BR:
mlit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KDJ21_006355 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
2Fe-2S_thioredx
DUF4777
Motif
Other DBs
NCBI-ProteinID:
UHA61277
LinkDB
All DBs
Position
1275623..1276192
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AA seq
189 aa
AA seq
DB search
MSLKQLTEEQIKEMAMVEVAYELFLEARKPYVFSDLVKEVADLLGLTQQQVEDKIAQFYT
DINIDGRFICVGENMWGLRTWYPYEQIEEEIVPVAKPKKKKSKKADDDEDLDDVYDELDE
EDLEYDDIDEYDDSDDDDEDEDFDDLDDADDLDEDEDDDDLIDDDDDDYDEDLDDDEDDD
FDDDSDDEK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttgagtctaaaacaattaacagaagaacaaataaaagaaatggcaatggttgaggttgcc
tacgaacttttcttagaagcaagaaaaccttacgtatttagtgatttagtaaaagaagta
gctgatcttctaggattaacacagcaacaagtagaagataaaattgctcaattttataca
gatatcaacatcgatggccgttttatttgtgttggtgaaaacatgtggggattacgcaca
tggtatccttacgagcaaattgaagaagaaatcgttcctgttgcaaaaccgaagaagaaa
aaatcgaaaaaagcagacgacgatgaagatctggatgatgtatacgatgagcttgacgag
gaagacctcgaatatgacgatatcgatgaatacgatgattcagatgacgacgatgaagat
gaagactttgatgatctagacgatgcggacgatctagatgaagatgaagatgatgatgat
ttaatcgatgatgatgacgatgactatgatgaagaccttgacgatgacgaagacgacgat
tttgatgatgattcagatgatgaaaaataa
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