Melampsora larici-populina: MELLADRAFT_50989 Help Entry MELLADRAFT_50989  CDS       T03138                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism mlr  Melampsora larici-populina Pathway mlr03020   RNA polymerase mlr03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:mlr00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     MELLADRAFT_50989   09124 Replication and repair    03420 Nucleotide excision repair     MELLADRAFT_50989  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mlr03021]     MELLADRAFT_50989    03400 DNA repair and recombination proteins [BR:mlr03400]     MELLADRAFT_50989 Enzymes [BR:mlr01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      MELLADRAFT_50989 Transcription machinery [BR:mlr03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      MELLADRAFT_50989 DNA repair and recombination proteins [BR:mlr03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       MELLADRAFT_50989 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  18928758 NCBI-ProteinID:  XP_007418175 JGI:  Mellp1_50989 UniProt:  F4S9X8 LinkDB All DBs Position Unknown AA seq 1786 aa AA seqDB search MNSNQFVHSSAPTRRVRTIQFGIMSPDEIKGFSVAKIEHPETYEEGGVHPKVGGLSDPRM GTIDRNMKCQTCGEDMSTCPGHFAHIELARPVYHVGFLNRVKKILECVCVQCGKLKSDLN TDPVLAQMVRRARDPKRRFVMVHKHCRGKNICEADANDEKPENPEEPPRPEDEQPKGHGG CGHAQPQIRKEGLKMFLQYTRRKGEEDDEGGHSLAGTERRPLPASDALSILRRISDEDLR ILGLHAEEARPEWMVLTVLPIPPPPVRPSIAMDGGTSRGEDDLTYKLAEVIKANQAVRKF ESEGAPAHVITEFETLLQWHIATYMDNDLPGQPQALQKSGRPVKSLRSRLKGKEGRLRGN LMGKRVDFSARTVITGDPNLQLDQVGVPYSIARNLTYPERVTPYNITYLQELVRNGPTEY PGARYVVRDTGDRIDLRYNKRADTFLQYGWIVERHLKDGDYVLFNRQPSLHKMSMMSHRI KLMPYSTFRLNLSVTPPYNADFDGDEMNLHVPQSEETRAELAQIAWVPRNIVSPQANKPV MGIVQDTLCGVRKFTLRDCFMDRDFVQNILLWVPGWDGVVPPPAILKPKPLWTGKQILSM CIPKGINLFRDDENQTSIPVADKGMWIEDGEIIYGVVDKKTVGASQGGIIHVIFREKGPE VTRGLFSGIQMVVNYWLLHHGFSIGIGDTVPDKGTMETITKFISEAKLEVANVISMAQED KLQPEPGMTIRESFEAKVNRALNMARDNAGRSAEQSLKDDNNVKQMVTAGSKGSFINISQ MSACVGQQSVEGKRIPYGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPQEFFFHAMAG REGLIDTAVKTAETGYIQRRLVKALEDVMVAYDGTVRNSLGDIVQFVYGEDGVDGGTVEY QNFDSVRLSHEKFERKFRVDVTDPSLTYKPGVLQVGLDSSSLTLQKILDGEWEQLKEDRQ SLRHFIFTDGNGRKPLPVNIRRIVQNAQQIFHIDFRKPSDLPPQEIIQMVHDLCERIIVV RGDDALSRAAQDNATLLFRILLRSNFATRRVLEEFHLNREAFVWVLGEIEARFNQSLAAP GEMCGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVALNIKTPSLTVYL NEELSNDIEAAKDIQTELAHTNLKTVTASTQIIYDPDPKSTVVEEDVDFVDAFFAVPDDE VESQIDRQSPWLLRLELDRAKMLDKKLSMSFVASRIAEVFKSDLFIIWSEDNAEKLIIRC RAMQSGEDKDEDDDQVEEDVFLREIEQMLGSISLRGVEGIQRVFMLQHNRNYICQNGEFD RKTEWVLETDGINLKKVLCVDGVDPVRTVSNNCVEIMTVLGIEAARASVLKELRNVIEFD GSYVNYRHLALLCDLMTNRGSLMAITRHGINRADTGPLMRCSFEETVEILMDAAATGEKD HCTGVAENVLLGQLAPMGTGAFDVALDLEMLKDVVIDHRLPVAGEIMGGRFVDGAMTPGG GMTPYAELGDGRTPARFDDAPVPRAMFSPIITAGADDGYGASNDIYGGYGGQSPYGAGGG TSPGYSPSSPSYNPAVSPAYTPTSPAWGGASPWMPSGTSPGYSPTSPRMGLTSPRFSPAS PNFSPASPNFSPASPAFSPTSPSFSPASPRFSPSSPNYSAGIGLATSPRYSPTSPAMSPS SPKFSPASPAFSPASPKYSPATQRWSPQSPAFSPASPKYSPASPAYSPTSPQYSPTSPQT SPQSPQWAPPGAAAAAAAAAATPAATTNGNHTNGYTSYSSAPSWSR NT seq 5361 nt NT seq  +upstreamnt  +downstreamnt atgaattctaatcaatttgtccattcgagtgctcccactcgacgggttcgtaccattcaa ttcggtatcatgtctcccgatgagatcaaaggctttagcgttgccaaaatcgaacatcct gaaacttacgaagaaggtggtgttcatcctaaagtgggtggtctgtcagacccgcgaatg ggaactattgacaggaatatgaaatgtcagacatgtggtgaagatatgtctacgtgtcct ggacactttgcacatatcgaacttgctcgaccggtctatcacgtcgggttcctgaatcgc gtcaagaaaatcctggagtgtgtttgtgtgcagtgtggaaagctcaagtccgatttaaac acagatcctgtcctagcccagatggtcagacgagctcgagatccgaaacgtcgatttgtc atggtccacaagcactgtcgtggcaagaacatttgcgaagctgacgcaaacgacgaaaaa ccggaaaatccagaggaacccccacggccagaagacgaacaacctaaagggcatggtggt tgtggtcatgctcagcctcagattcgaaaagaaggccttaagatgtttctacaatataca agaagaaaaggtgaagaagatgacgagggtggtcacagcttggctggaacagaacgaaga cctttacctgcatctgacgcgttatcgatcctacggcggatttcggatgaagacctcagg attcttggcttacatgccgaagaagctcgaccggagtggatggtactgacagtcttacct attcctcctccacctgttcgtccaagtatcgctatggacggtggtactagtcgtggagag gatgatttgacttataagttagctgaagtcatcaaagcgaatcaagccgtccgaaaattc gagagcgagggtgcacctgcacatgtaatcacagagtttgaaactctacttcagtggcac attgcaacctatatggataacgatctaccaggtcaaccccaagctcttcaaaaatcgggt cggcctgtcaaatcattacgatcacgacttaagggaaaagagggccgattgagaggtaac ttgatgggtaaacgtgttgatttctctgcacggacagtaattactggagatccaaacctt cagcttgatcaggtcggtgtaccctactctatcgctcggaatttaacctacccggaacgg gtgacgccctacaatatcacctatctacaagaacttgtgcgtaatgggccgactgagtat ccaggtgcaagatatgtggttcgagacacgggtgatcggatcgatcttcgttacaacaaa cgagccgacacgtttttacaatatggatggattgttgagaggcatttaaaggatggtgat tatgtgctattcaaccgacaaccatcgctgcacaagatgagtatgatgtcacatcgtatc aaattgatgccttattctacatttcgactcaacttatccgtcactccaccatataacgca gattttgacggagacgaaatgaacttgcacgttccacagtctgaagagactcgcgctgaa ctcgctcaaattgcttgggtccctcgtaatatcgtctcacctcaagcaaataaaccagtt atgggtatcgttcaagacacgctctgtggggttcggaagtttactttacgagattgtttc atggatcgagattttgttcagaatatcttgttgtgggtcccaggttgggacggtgttgtt ccgcctccggctattctcaagcccaagccgttgtggacaggaaaacagattttatcaatg tgtataccaaaaggaatcaacctattccgagacgatgaaaatcaaacttcgattcctgtt gccgataaagggatgtggattgaggatggagagatcatctatggtgtggttgataagaag actgtcggtgcctctcaaggaggaatcattcatgtaatcttccgagagaaaggaccagag gtcacgaggggtctgttttcaggcattcaaatggtggtaaactactggttgctacatcat ggcttcagtattggaatcggtgataccgtccctgacaaagggacgatggaaaccatcacc aaatttatatccgaggctaaactcgaagtcgccaacgttatctcgatggctcaagaggac aagttgcaacctgaacctggtatgaccatccgagaatccttcgaggccaaagtgaatcga gccttgaacatggctcgtgataatgctggtcgatctgccgaacaatcgttgaaggatgat aataacgtcaaacagatggtcacggctggttcgaaaggttcattcatcaacatctctcaa atgtcagcttgtgtcggacaacaatcggttgagggtaaacgaattccttacggtttcaag tatcgtaccttgccccatttcaccaaggatgattactcgcccgaatctcgtggatttgtt gagaattcctatcttcgtggattgacaccacaggagttcttctttcatgctatggctggt cgtgaaggtttgattgataccgctgtaaaaacagcagagacaggttatatccaaagaaga ttggtgaaagcgttagaggatgtgatggtggcttatgatggaacggtacgaaactcatta ggtgatatcgtgcagttcgtttatggtgaagatggggttgatggaggaactgtagagtat caaaacttcgacagcgtaaggttgtcgcatgaaaagtttgagagaaaatttagggttgat gtcactgaccccagtctgacttataaaccgggtgtcctacaagttggtctagacagtagt tcacttacacttcagaagatcttagatggagaatgggagcagttaaaggaagaccgacaa tcacttcgtcattttatctttactgatggtaatggtcggaaaccattaccggtcaatatc cgtcgaatcgttcaaaacgctcagcaaatctttcacatcgatttcaggaaaccgagtgat ctccctcctcaggagatcatccagatggttcacgatctttgcgaacggatcatcgttgtt cgtggggatgacgcacttagtcgtgcagctcaagacaacgcgactctcctgttccgaatt ctgctccggtccaatttcgctactcgaagagtgctagaagaattccatctcaatcgggag gctttcgtatgggtattaggtgaaattgaagctcgtttcaatcaatcgctagctgcccct ggagagatgtgtggcacattagcagcacagtccatcggagaacctgcaactcagatgact ctgaatacattccattacgccggtgtatcgagtaagaacgttacattgggtgtgcctcga ctcaaggagattatcaatgtggccctcaatatcaagacaccttctttgacggtctatctg aacgaagagctttcgaatgacattgaagctgcaaaagatatccaaactgaacttgcacat accaatctcaagaccgtcacggcttcgacccaaatcatctacgatccagatcctaagagc actgttgttgaagaagatgtcgatttcgtcgatgctttctttgcagttcctgatgatgaa gtcgaatcacaaatcgatcgacaatccccttggttactccgcctcgagctcgatcgtgca aagatgttggacaagaagttgtcgatgagttttgtagcatctcgaattgcagaagtcttc aaatcggaccttttcatcatctggtcagaagataatgctgagaaacttatcatccgttgt cgagcgatgcagtctggcgaagacaaggatgaagatgatgatcaagtagaagaagacgtc ttcctgagggaaattgaacagatgttaggaagtatctctctacgtggtgtcgaaggtatc caacgagtctttatgcttcaacataatcgcaattacatttgtcaaaacggggaatttgac cgaaagaccgaatgggtgttggagacggatggcatcaacttgaagaaagtcttgtgtgtt gatggagtcgatccagtgcggacggtgtcaaacaattgtgttgaaatcatgacggtttta ggtatcgaagccgctcgagcttcagttctgaaagaattaagaaacgtcattgaatttgat ggatcatatgttaattatcgacatttggccctcttgtgtgatctgatgacaaatcgaggt tcactgatggccatcactcggcatggtatcaatcgagctgacactgggccgctcatgcga tgttcttttgaagagactgtggagatcttgatggacgcagctgcgacgggagagaaggat cattgtaccggtgtggctgagaacgtactgctaggtcagctagccccgatgggtactggt gcattcgacgtggcattggatctcgaaatgttgaaggatgtagtcatcgaccatcgatta ccagtggccggagaaatcatgggtggcaggtttgttgatggagccatgacgcctggtgga gggatgacaccctacgctgagctgggtgatggtcgaaccccagctcggttcgatgatgca ccagtcccacgtgcaatgttctcacctatcatcacagctggggctgatgacggatacgga gcaagtaatgatatctacggaggttatggtggacaatcgccatatggggcaggtggtggc acttctcctggttattcaccgtcgagtccttcttacaatccagccgttagtcctgcatac actcctacaagtccagcttggggtggtgcgtcgccgtggatgccaagtgggacttcacca ggttatagccctacgagtccaaggatgggtctcaccagtcctcgattttcacctgcgtcc cctaatttctcaccggcttcgcccaatttttctccggcttcgccagcattttcgccaaca tcgccatcattttctcccgcctccccgcggttctcaccaagcagtccaaactactctgct ggtatcggtcttgctacttctcctcgctattcacctacatcacctgcgatgtcaccttct tcgcccaaattcagtcccgctagcccggcattctcaccggcatcaccaaaatactctccg gccactcagaggtggtctcctcagtcgcctgcattctctcctgcaagccctaagtacagc cctgcctcaccggcttacagccctacaagccctcaatactcacctacctcacctcaaacc tctccacaatctccacaatgggctccacctggagcagcggcagcggcagcagcagcagcc gctaccccagcagctaccaccaatgggaatcataccaatggttacacatcttatagttct gcaccttcttggtcgcgttga

DBGET integrated database retrieval system