Mirounga leonina (Southern elephant seal): 117997458
Help
Entry
117997458 CDS
T07472
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlx03016
]
117997458 (CDKAL1)
Enzymes [BR:
mlx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117997458 (CDKAL1)
Transfer RNA biogenesis [BR:
mlx03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117997458 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
117997458
NCBI-ProteinID:
XP_034841656
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MPSASCDTLLDDIEDIVSQGDLKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIP
GIQKIWMRTWGCSHNNSDGEYMAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVER
ARQSFQEGVCEIWLTSEDTGAYGRDIGTNLPALLWQLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKIPQVPAQVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYD
SGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTEDFRNRLGNHLSMVPHTCAVRRDPTS
SRMALRLQRLHQDCTLRASVGLALFALLLAFLVKVYN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgcgacacactcctggacgacatagaagatattgtgtcacaggga
gatttaaagccacaagataggcattctgcacgaaagcacgttgttccaaaggcacgaaag
agaaacacccaaaaatatttgcaagaggaaaacagtccaccaagtgacagcactattcca
ggcatacagaaaatttggatgcgaacatggggttgttctcataataattcggatggagaa
tatatggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagacgcc
gatttatggctcctgaatagttgtaccgttaaaaacccagctgaagatcactttagaaac
tcaattaaaaaagctcaagaggagaacaagaagatagtgcttgctggctgtgttcctcaa
gcccagcctcggcaggactaccttaaaggactgagtatcataggggttcaacagatagac
cgagtggtagaagttgtggaggaaacaattaaaggtcattctgtgagactgctgggtcag
aaaaaggataatggaaagcgcttgggtggagcgcgattggatttgccaaagatcaggaag
aatccactgatagaaatcatttccatcaatactgggtgtctcaatgcttgtacctactgc
aaaactaaacacgccagaggaaatttggccagttacccaattgatgaactggtagaaaga
gccagacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacaggg
gcttacggcagggacattggcaccaatctccccgcactgctgtggcaactggttgaagtg
attcctgagggagcaatgctgaggcttggcatgacaaatccaccctatattttagagcat
ctggaggaaatggcaaaaatccttaatcatccccgagtctatgcctttctgcacatcccg
gtccagtctgcctctgacactgtcctcatggaaatgaaacgagaatactgcgtggctgac
ttcaaaagagtagtggattttctgaaagagaaagttcctggaataactcttgctacagat
attatctgtggttttcctggagaaacagatcaagattttcaagaaacagtgaagcttgtg
gaagagtacaaatttccaagcctctttattaaccagttttacccaagaccaggaactcct
gctgcaaaaatcccacaggttccagcacaagtgaaaaagcaaagaacgaaagatctttcc
cgggtattccattcctacaatccgtatgaccacaagattggcgaaagacaacaagtgtta
gtgacagaagaatcttttgattccaagttttacgttgcccacaatcgattctacgagcag
gttttagtgccaaagaaccccacattcatggggaaaatgatcgaagtggacatttatgac
tcaggcaaacattttatgaaagggcagccggtgtcagatgccaaagtatacacgccatcc
atcagcaaaccattagcaaagggagaagtctcaggtttaacagaggacttcagaaatagg
cttgggaatcacctgagcatggtgccccacacctgtgcggttcggcgggaccccacgagc
tccagaatggcactccgcttgcaaagactccatcaagactgcaccctgagggcgtctgtg
ggcctggctctgtttgctctccttctggcttttttggtcaaagtctataattaa
DBGET
integrated database retrieval system
