Mirounga leonina (Southern elephant seal): 118025249
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Entry
118025249 CDS
T07472
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04721
Synaptic vesicle cycle
mlx04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
118025249 (SLC6A4)
04721 Synaptic vesicle cycle
118025249 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mlx02000
]
118025249 (SLC6A4)
Transporters [BR:
mlx02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118025249 (SLC6A4)
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
118025249
NCBI-ProteinID:
XP_034883542
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKELSACKDKEDCQENGVLQKGVPVPEDKVESGHVSNGYSAVPSPGAGDDSQ
HSIPATTTALAAEAHQGERETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIGFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSENNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGLSWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVAFIEAVAVYWFYGITQFCSDVKEMLGFDPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctatcagcgtgtaaggataaagaagat
tgtcaggaaaacggagttctgcagaagggtgtccctgtccctgaggataaggtggagtct
ggccacgtctccaacgggtactcagcggtgccgagccctggtgccggagatgactctcag
cactccattccagccaccaccaccgccctagcggctgaggctcatcaaggggaacgggag
acctggagcaagaagatggatttcctcctctcggtcattggctatgccgtggacctgggc
aacgtctggcgctttccctacatctgttaccagaatggagggggggcattcctcctgccc
tacacgatcatggccatttttggggggatcccactgttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccgattttcaaaggg
atcggttacgccatctgcatcatcggcttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
acgaactcctggaacactggcaactgcaccaactacttctccgagaacaacgtcacctgg
acgctgcactcgacgtcccccgcagaagaattttacacgcgccacgttctgcagatccat
cggtctaagggacttcaggacctgggggggctcagctggcagctcaccctctgcatcatg
ctgatcttcactgttatctacttcagtatctggaagggtgtcaaaacgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctctcggtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttttatttgaaacccaactggcagaaactc
ctggagacaggggtatgggtagatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctattggctttcgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcgtttctggatttgtcatcttc
acggtgctcgggtatatggccgagatgaggaatgaggatgtgtccgaggtggccaaagac
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
acgttctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggaaggggtgatcacagccgtgctagatgagtttccgcacatctgggccaag
cgccgggagtggtttgtgcttggtgtggtcattacctgcttctttggatccctggccacc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacggggcccgcc
gtgctcaccgtcgcctttatagaggctgttgctgtgtattggttttacggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcgaccctgggtggttttggaggatctgc
tgggtagccatcagccctctctttctcctgttcatcatttgcagttttttgatgagcccg
ccccagctccgacttttccagtataactatcctcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatatagcttaccggctgatcatcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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