Methanosarcina mazei C16: MSMAC_2019
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Entry
MSMAC_2019 CDS
T04626
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMAC_2019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmac03021
]
MSMAC_2019
Enzymes [BR:
mmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMAC_2019
Transcription machinery [BR:
mmac03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMAC_2019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CBP66
DUF1947
Motif
Other DBs
NCBI-ProteinID:
AKB71909
UniProt:
A0A0E3RVE4
LinkDB
All DBs
Position
complement(2471947..2473173)
Genome browser
AA seq
408 aa
AA seq
DB search
MMSISEATVDSMIKDLPLPSNILKTLRDDVIKAGVSKKEMEEIIERVMEEYTVSCIEPCD
AAGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSK
EHPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDRVK
EKFNEELNVLVSISPDIDNQIVITPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEG
EEYTLYTEGSALREVLQFEGVDRTRTSTNNINEIYEVLGIEAARNAIIKEATDTLREQGL
TVDIRHIMLVADLMTSDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGYVDQL
QGVTENIIVGQPIRMGTGDVHLISRKAEKVVEVPPEIETAEEIEVEEG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcatcagcgaagccacagtagacagcatgataaaggaccttccacttccttct
aacattttaaaaactctgagggacgatgttatcaaggcaggggtaagcaaaaaagaaatg
gaagagattatagaaagggtaatggaagaatatacggtctcgtgcattgagccctgtgac
gctgctggagttgttgcagcccagtcaataggagaaccgggcactcagatgacgatgcgt
accttccactacgccggtgtggctgagattaacgttaccctgggtcttcctcgtttgatt
gaaatcgtggatgcaaggaagattccgagcactcctatgatgacaattgccctttccaaa
gaacacccggaagactatgcttacgacagggaaaagacaagagcccttgcatgggagatt
gaagcaaccaaaatagaccatatcgctgacgttaccactgacctttcccagatgaagctt
ataatagacctgcacgaaaaagcaatggaaggcaggaatattacaatagaccgggtaaag
gagaagttcaatgaagagctcaatgtcctggtcagcatctctcctgatatagacaaccag
attgttatcactcccggagagccttcttacagggaactgctccagcttgcaaagagcatc
cataatgttaccctcaaaggcatagaagggatcaaaagagtcgtggtccgaaaagagggc
gaagaatataccctgtatacagaagggtcggctcttcgtgaagtcctgcagtttgaaggc
gtggacaggaccagaaccagcacaaacaacattaacgaaatttacgaagtgttggggatc
gaggctgcaagaaacgcaatcatcaaggaggctacggataccctgcgtgaacagggtctt
accgtggacatcaggcacatcatgcttgtggcagaccttatgacttcggacggggaagta
aaacagataggcaggcacggtatttcaggtgaaaaggcaagtgtatttgcccgtgcggct
ttcgaagttactgtgaaccatcttctcgatgcaggtatgcgcggatacgtggaccagctg
cagggtgttacggaaaacatcattgtcggccagccgatccgcatgggtacgggagacgta
caccttataagcagaaaagcagagaaagtggtggaagtaccaccggaaatcgaaacagca
gaagaaattgaagtcgaagaggggtga
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