KEGG   Methylophaga marina: GCM100_26520
Entry
GCM100_26520      CDS       T09183                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
mmaf  Methylophaga marina
Pathway
mmaf00740  Riboflavin metabolism
mmaf01100  Metabolic pathways
mmaf01110  Biosynthesis of secondary metabolites
mmaf01240  Biosynthesis of cofactors
mmaf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mmaf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    GCM100_26520 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GCM100_26520 (ribD)
Enzymes [BR:mmaf01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     GCM100_26520 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     GCM100_26520 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BDZ74933
LinkDB
Position
2610353..2611465
AA seq 370 aa
MTMASAEFYMARAIELAKNGLYTTDPNPRVGCVIVRDNQIVGEGWHQRAGESHAEVNALH
QAGEQARGADCYVTLEPCSHYGRTPPCADALVNAGVKRVFIAMTDPNPVVSGSGIHRLRE
AGIEVHTKLLSSESEKLNPGFSYRMRHGRPYIRSKVAMSLDGRTAMASGESKWITGPEAR
QDVQNLRARSSAIMTGIGTILADDPQLNVRFSADHDNWYPSGQKIRQPLKIIVDSDGRLP
ASAQILKEGKVLVITANDITIAEPAECLVLPSVDQNIDLNALMAVLAQREINELMIEAGG
VLNGALLKAGLIDELVIYMAPKIMGDMARGVFHLPEMMTMSQNISLTIDDIRAVGKDWRI
TARPIYNEES
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaccatggcttctgctgaattttatatggcaagagccattgagcttgccaaaaatgga
ctatacacgactgaccctaaccctcgggttggttgtgtcattgtgagagataatcagatt
gttggtgaaggctggcatcagcgggcaggagagagtcacgctgaagtaaacgctctacac
caagcgggtgagcaggctagaggggcggactgttatgtcacgcttgaaccctgtagccat
tatggacgtacaccgccttgcgctgatgctctggttaatgctggtgtgaaacgcgttttt
atagcgatgactgatcctaatcccgttgtttcaggttcaggcatacatcgcctgagagag
gcggggatagaggtccacaccaaactgttgagctctgaatcagagaagttgaatcctggt
ttttcctatcgtatgcgtcatggtcgaccgtatatcagaagtaaagtcgccatgagcctt
gatggccgaacagctatggcatcgggtgagagtaagtggataaccggccctgaagccaga
caggatgtacaaaatctgcgcgcgcgcagctcagccattatgactggaattggtacgata
ctcgcggacgatccgcagttaaatgtccgtttttctgcagatcatgataattggtaccct
tctggtcagaagatcagacaaccgctcaaaatcattgtggatagtgatggacgattgcct
gcgagtgctcaaattctcaaagagggtaaagtactggtgattacggccaatgatattact
atcgcggaaccagccgaatgtttagttttgccctctgtagaccaaaatatcgatctgaat
gcgttgatggcggtactggcacaacgtgaaatcaatgagttgatgattgaagccggtggc
gtcttgaatggggcattgttaaaagcaggtttaatcgatgaattagtcatatacatggcc
cccaaaattatgggcgatatggcacgtggtgtgtttcatttacctgagatgatgacaatg
tctcagaatatttccctaacaattgatgatatccgggcagtaggtaaggattggcgtatc
actgcaagaccaatatataacgaggaatcttaa

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