Methylocaldum marinum: sS8_4623
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Entry
sS8_4623 CDS
T05638
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmai03009
]
sS8_4623
Enzymes [BR:
mmai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
sS8_4623
Ribosome biogenesis [BR:
mmai03009
]
Prokaryotic type
ribosomal protein modification factors
sS8_4623
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BBA36553
UniProt:
A0A250KY04
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Position
5008894..5010207
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AA seq
437 aa
AA seq
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MKTPRIGFVSLGCPKALVDSERILTKLRAEGYSLVSTYKDADLVVVNTCGFIDAAVEESL
EAVGEALKENGKVVVTGCLGVRENEIRERHPQVLKITGAHAYEEVVEAVHEHLPPLHDPF
VDLVPPEGIRLTPRHYAYLKISEGCNHRCTFCIIPSLRGDLASRPIGEVMDEAERLVSAG
VKELLVVSQDTSAYGVDLKYRTGFWGGRPLKTRFYDLAKALGELGIWVRMHYVYPYPHVD
EVVPLMAEGKILPYLDIPFQHASTRILKSMKRPVATEDVLARIALWRSICPEIALRSTFI
VGFPGETDADFEQLLEFLQAARLDRVGCFTYSPVKGAAANELPNPVPESVKEERLARFMG
VQARISADRLQSKIGKRETILVDEVVDEGAVARSRADAPEIDGQVFIDGATHLKVGDWAE
VIFEDADDHDLWAVPAS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccccgcatcggtttcgtcagcctgggctgccccaaggcgctggtagatagt
gaacgcattttgaccaagctgcgtgctgaaggttatagcctggtttcaacctataaggat
gccgatctcgtcgtcgtgaatacctgcggattcatcgacgctgccgtggaggaatcgctg
gaggccgtaggcgaggctctgaaagagaacggcaaggtcgtggtgacgggttgcctgggc
gttcgcgagaacgaaattcgcgaacgacacccccaggtgctgaagattaccggcgctcat
gcttacgaggaggtcgtcgaggcggtgcacgagcatttgccgccgcttcacgatcccttt
gtcgatctggtgccgccggagggtatcaggttaacgccccgtcattatgcttacctgaag
atttccgaaggctgcaatcataggtgcaccttctgcatcattccgagtctgcgcggcgat
ttggccagccgcccaatcggcgaggtgatggacgaggcggagcgtctggtttcagccggc
gtgaaggaattgctcgtcgtatcgcaagataccagtgcttacggcgtcgatttgaagtac
cgaaccggattttggggcgggcgtccgctcaagacccgcttttatgacctggccaaggcc
ttgggagaactcggaatttgggtgcgcatgcattacgtctacccgtatccgcatgtggat
gaagtcgttccactcatggccgaggggaaaatcctcccgtatctcgatataccgttccaa
catgccagtactcggattctaaagtcgatgaagcgtccggtcgccacagaggatgtcttg
gcccggatcgctttgtggcggagcatctgtccggaaatcgcgcttcgcagcacgtttatc
gtgggatttccaggggaaaccgacgctgatttcgagcaactgcttgagtttttgcaagca
gcgcgactcgaccgagtaggctgttttacctattcgcccgtcaagggagcggccgccaac
gagttgcccaatccggtgcccgagtctgtaaaagaggaacgcctggcacggttcatgggg
gttcaggctcgaatcagtgctgatagactacagtccaagatcgggaagcgggaaactatt
ttggtcgatgaagtcgtggatgaaggggcggtcgctcgaagccgagccgatgcgcccgag
atcgatggccaggtttttatcgacggtgcgacccatctgaaagtcggcgactgggccgag
gtgatttttgaagacgccgatgaccacgatctatgggcggttccggcaagttag
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